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Aliases : SHM2
Description : serine hydroxymethyltransferase *(SHM). serine hydroxymethyltransferase. EC_2.1 transferase transferring one-carbon group
Gene families : OG0000639 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000639_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra016147 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_39 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003777 | microtubule motor activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006534 | cysteine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0007018 | microtubule-based movement | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009092 | homoserine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019346 | transsulfuration | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019842 | vitamin binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0030151 | molybdenum ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0050667 | homocysteine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0070279 | vitamin B6 binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR039429 | SHMT-like_dom | 51 | 458 |
| No external refs found! |