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  5. Bra015401

Bra015401 (HDG2)


Aliases : HDG2

Description : HD-ZIP IV-type transcription factor


Gene families : OG0004092 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004092_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra015401
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_112


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008289 lipid binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000096 sulfur amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0000097 sulfur amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0001932 regulation of protein phosphorylation IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0005975 carbohydrate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006555 methionine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006790 sulfur compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008172 S-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008652 amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009066 aspartate family amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009086 methionine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009606 tropism IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010274 hydrotropism IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019220 regulation of phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019900 kinase binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019901 protein kinase binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0030246 carbohydrate binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031399 regulation of protein modification process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0042325 regulation of phosphorylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043549 regulation of kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044272 sulfur compound biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045859 regulation of protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051087 protein-folding chaperone binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051174 regulation of phosphorus metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051338 regulation of transferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071586 CAAX-box protein processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 254 467
IPR001356 Homeobox_dom 67 123
No external refs found!