Aliases : VAMP721, ATVAMP721, VAMP7B, AT VAMP7B
Description : R-type component *(VAMP721/VAMP722) of SNARE cell-plate vesicle fusion complex. R-type VAMP7-group component of SNARE longin membrane fusion complex
Gene families : OG0000371 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000371_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa (Bra) PCC: Bra015345 | |
Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_220 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bra005523 | SAR1, VAMP722, ATVAMP722 | R-type VAMP7-group component of SNARE longin membrane... | 0.03 | OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0001522 | pseudouridine synthesis | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0003725 | double-stranded RNA binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0003924 | GTPase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0005198 | structural molecule activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0005525 | GTP binding | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0005643 | nuclear pore | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006325 | chromatin organization | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006334 | nucleosome assembly | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006338 | chromatin remodeling | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006508 | proteolysis | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006810 | transport | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006886 | intracellular protein transport | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0008104 | protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0008233 | peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0008236 | serine-type peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0009982 | pseudouridine synthase activity | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0015031 | protein transport | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0016192 | vesicle-mediated transport | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016787 | hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016866 | intramolecular transferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0017171 | serine hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0030117 | membrane coat | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0030118 | clathrin coat | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0030120 | vesicle coat | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0030125 | clathrin vesicle coat | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0030132 | clathrin coat of coated pit | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0032991 | protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0032993 | protein-DNA complex | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0033036 | macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0034728 | nucleosome organization | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0045184 | establishment of protein localization | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0046907 | intracellular transport | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0051179 | localization | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0051234 | establishment of localization | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0051641 | cellular localization | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0051649 | establishment of localization in cell | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0070727 | cellular macromolecule localization | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0071702 | organic substance transport | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0071705 | nitrogen compound transport | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0071824 | protein-DNA complex organization | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0098796 | membrane protein complex | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0098797 | plasma membrane protein complex | IEP | Brassica rapa GO terms from Neighborhoods |
No external refs found! |