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  5. Bra015241

Bra015241 (OTP51)


Aliases : OTP51

Description : plastidial RNA splicing factor *(OTP51)


Gene families : OG0022943 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra015241
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_249


Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003747 translation release factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006813 potassium ion transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008079 translation termination factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010206 photosystem II repair IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010207 photosystem II assembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Brassica rapa GO terms from Neighborhoods
BP GO:0022411 cellular component disassembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0030091 protein repair IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043933 protein-containing complex organization IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044183 protein folding chaperone IEP Brassica rapa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071805 potassium ion transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140662 ATP-dependent protein folding chaperone IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004860 LAGLIDADG_2 597 755
IPR002885 Pentatricopeptide_rpt 255 273
IPR002885 Pentatricopeptide_rpt 399 420
IPR002885 Pentatricopeptide_rpt 534 559
IPR002885 Pentatricopeptide_rpt 498 526
No external refs found!