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  5. Bra014288

Bra014288 (Y14)


Aliases : Y14

Description : component *(Y14) of RNA quality control Exon Junction complex


Gene families : OG0006439 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra014288
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_29


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003689 DNA clamp loader activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005663 DNA replication factor C complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006260 DNA replication IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030118 clathrin coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030125 clathrin vesicle coat IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0030132 clathrin coat of coated pit IEP Brassica rapa GO terms from Neighborhoods
CC GO:0031011 Ino80 complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0070603 SWI/SNF superfamily-type complex IEP Brassica rapa GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0097346 INO80-type complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0098797 plasma membrane protein complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:0140513 nuclear protein-containing complex IEP Brassica rapa GO terms from Neighborhoods
CC GO:1904949 ATPase complex IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000504 RRM_dom 95 163
No external refs found!