Bra014136 (ICU9, AGO1, AtAGO1)


Aliases : ICU9, AGO1, AtAGO1

Description : miRNA recruiting factor (AGO) of RNA-induced silencing complex (RISC) assembly


Gene families : OG0006361 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra014136
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_232


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005096 GTPase activator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006811 monoatomic ion transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006812 monoatomic cation transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006813 potassium ion transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008047 enzyme activator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009141 nucleoside triphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009150 purine ribonucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009259 ribonucleotide metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0015079 potassium ion transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0019693 ribose phosphate metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0032259 methylation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034220 monoatomic ion transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046034 ATP metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071805 potassium ion transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098655 monoatomic cation transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098660 inorganic ion transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0098662 inorganic cation transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901702 salt transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:1902600 proton transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR032473 Argonaute_Mid_dom 615 690
IPR032472 ArgoL2 558 604
IPR003165 Piwi 708 1027
IPR003100 PAZ_dom 443 547
IPR032474 Argonaute_N 221 356
IPR024357 Argonaut_Gly-rich 110 203
IPR014811 ArgoL1 367 416
No external refs found!