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  5. Bra013977

Bra013977 (LUC7B)


Aliases : LUC7B

Description : pre-mRNA-processing protein *(LUC7)


Gene families : OG0006873 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra013977
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_178


Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEA Interproscan
CC GO:0005685 U1 snRNP IEA Interproscan
BP GO:0006376 mRNA splice site recognition IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0005777 peroxisome IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006417 regulation of translation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006448 regulation of translational elongation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006449 regulation of translational termination IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008237 metallopeptidase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009891 positive regulation of biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009893 positive regulation of metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010608 post-transcriptional regulation of gene expression IEP Brassica rapa GO terms from Neighborhoods
BP GO:0010628 positive regulation of gene expression IEP Brassica rapa GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0018024 obsolete histone lysine N-methyltransferase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031325 positive regulation of cellular metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034248 regulation of amide metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0034250 positive regulation of amide metabolic process IEP Brassica rapa GO terms from Neighborhoods
CC GO:0042579 microbody IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0043022 ribosome binding IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043226 organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Brassica rapa GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043243 positive regulation of protein-containing complex disassembly IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043244 regulation of protein-containing complex disassembly IEP Brassica rapa GO terms from Neighborhoods
MF GO:0044877 protein-containing complex binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045727 positive regulation of translation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045901 positive regulation of translational elongation IEP Brassica rapa GO terms from Neighborhoods
BP GO:0045905 positive regulation of translational termination IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048518 positive regulation of biological process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0048522 positive regulation of cellular process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051128 regulation of cellular component organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051130 positive regulation of cellular component organization IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051246 regulation of protein metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0051247 positive regulation of protein metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004882 Luc7-rel 207 325
IPR004882 Luc7-rel 2 172
No external refs found!