Bra013873

Description : GeBP-type transcription factor

Gene families : OG0014424 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra013873
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_211

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000290	deadenylation-dependent decapping of nuclear-transcribed mRNA	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003674	molecular_function	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003676	nucleic acid binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003677	DNA binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004371	glycerone kinase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005667	transcription regulator complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005669	transcription factor TFIID complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006071	glycerol metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006353	DNA-templated transcription termination	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006401	RNA catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006402	mRNA catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006479	protein methylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007062	sister chromatid cohesion	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0007064	mitotic sister chromatid cohesion	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008213	protein alkylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009890	negative regulation of biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009892	negative regulation of metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0010181	FMN binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010558	negative regulation of macromolecule biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0010629	negative regulation of gene expression	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016571	histone methylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0018022	peptidyl-lysine methylation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0018024	obsolete histone lysine N-methyltransferase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0018193	peptidyl-amino acid modification	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019400	alditol metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019438	aromatic compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019751	polyol metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0022402	cell cycle process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0031324	negative regulation of cellular metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0031327	negative regulation of cellular biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034654	nucleobase-containing compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034968	histone lysine methylation	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0042393	histone binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043085	positive regulation of catalytic activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0043565	sequence-specific DNA binding	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044093	positive regulation of molecular function	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0110154	RNA decapping	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0110156	methylguanosine-cap decapping	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140110	transcription regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007592	GEBP	138	235

External Links

No external refs found!

Bra013873

Expression Profile

Co-expression Networks

Functional Annotation