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Aliases : PTAC16
Description : cofactor of plastid-encoded RNA polymerase *(TAC16)
Gene families : OG0061804 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp8g16460.1 | |
| Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_104 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003746 | translation elongation factor activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003824 | catalytic activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004109 | coproporphyrinogen oxidase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004356 | glutamine synthetase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004418 | hydroxymethylbilane synthase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004655 | porphobilinogen synthase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004820 | glycine-tRNA ligase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005198 | structural molecule activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005509 | calcium ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005840 | ribosome | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006006 | glucose metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006353 | DNA-templated transcription termination | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006399 | tRNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006412 | translation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006414 | translational elongation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006426 | glycyl-tRNA aminoacylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006518 | peptide metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006520 | amino acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006541 | glutamine metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006826 | iron ion transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008150 | biological_process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008942 | nitrite reductase [NAD(P)H] activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009521 | photosystem | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009522 | photosystem I | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009523 | photosystem II | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009538 | photosystem I reaction center | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0010109 | regulation of photosynthesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0010207 | photosystem II assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0010242 | oxygen evolving activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0015979 | photosynthesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016211 | ammonia ligase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016491 | oxidoreductase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016634 | oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016661 | oxidoreductase activity, acting on other nitrogenous compounds as donors | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016853 | isomerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016874 | ligase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016987 | sigma factor activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0018208 | peptidyl-proline modification | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019538 | protein metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0019898 | extrinsic component of membrane | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0030145 | manganese ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0033573 | high-affinity iron permease complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034755 | iron ion transmembrane transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042549 | photosystem II stabilization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043038 | amino acid activation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0043169 | cation binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043226 | organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043603 | amide metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043604 | amide biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044281 | small molecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0046857 | oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0046872 | metal ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0098796 | membrane protein complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0098809 | nitrite reductase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0110165 | cellular anatomical entity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:1902494 | catalytic complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:1902495 | transmembrane transporter complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:1905862 | ferroxidase complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:1990204 | oxidoreductase complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:1990351 | transporter complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR016040 | NAD(P)-bd_dom | 195 | 405 |
| No external refs found! |