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  5. Mp8g03280.1

Mp8g03280.1


Description : component *(eS4) of small ribosomal-subunit (SSU) proteome


Gene families : OG0000408 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000408_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp8g03280.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Bra005923 No alias component *(eS4) of small ribosomal-subunit (SSU) proteome 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra020369 No alias component *(eS4) of small ribosomal-subunit (SSU) proteome 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra028708 No alias component *(eS4) of small ribosomal-subunit (SSU) proteome 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_5_149541.1 No alias component *(eS4) of small ribosomal-subunit (SSU) proteome 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_8_102800.1 No alias component *(eS4) of small ribosomal-subunit (SSU) proteome 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Lsat_1_v5_gn_9_37241.1 No alias component *(eS4) of small ribosomal-subunit (SSU) proteome 0.03 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr1.01225 No alias component *(eS4) of small ribosomal-subunit (SSU) proteome 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.02107 No alias component *(eS4) of small ribosomal-subunit (SSU) proteome 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr4.04362 No alias component *(eS4) of small ribosomal-subunit (SSU) proteome 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004222 metalloendopeptidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006383 transcription by RNA polymerase III IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006412 translation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0007275 multicellular organism development IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008237 metallopeptidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009733 response to auxin IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032501 multicellular organismal process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032502 developmental process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043226 organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043603 amide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0048856 anatomical structure development IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR013845 Ribosomal_eS4_central_region 95 169
IPR032277 Ribosomal_eS4_C 212 256
IPR013843 Ribosomal_eS4_N 3 38
IPR002942 S4_RNA-bd 43 90
IPR005824 KOW 178 210
No external refs found!