Aliases : MEF25
Description : RNA editing factor *(MEF25)
Gene families : OG0027473 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brassica rapa (Bra) PCC: Bra013235 | |
Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_99 |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000151 | ubiquitin ligase complex | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004637 | phosphoribosylamine-glycine ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0005488 | binding | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0005680 | anaphase-promoting complex | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0006144 | purine nucleobase metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0008270 | zinc ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009112 | nucleobase metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0009113 | purine nucleobase biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0010498 | proteasomal protein catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0016579 | protein deubiquitination | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0016755 | aminoacyltransferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0030163 | protein catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0031145 | anaphase-promoting complex-dependent catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0043167 | ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0043169 | cation binding | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0043687 | post-translational protein modification | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0046112 | nucleobase biosynthetic process | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0046872 | metal ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0046914 | transition metal ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0061630 | ubiquitin protein ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0070646 | protein modification by small protein removal | IEP | Brassica rapa GO terms from Neighborhoods |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0097602 | cullin family protein binding | IEP | Brassica rapa GO terms from Neighborhoods |
MF | GO:0101005 | deubiquitinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0140513 | nuclear protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:0140535 | intracellular protein-containing complex | IEP | Brassica rapa GO terms from Neighborhoods |
CC | GO:1990234 | transferase complex | IEP | Brassica rapa GO terms from Neighborhoods |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_rpt | 145 | 173 |
IPR002885 | Pentatricopeptide_rpt | 248 | 271 |
IPR002885 | Pentatricopeptide_rpt | 449 | 470 |
IPR002885 | Pentatricopeptide_rpt | 276 | 306 |
IPR002885 | Pentatricopeptide_rpt | 176 | 205 |
IPR046848 | E_motif | 491 | 553 |
IPR002885 | Pentatricopeptide_rpt | 373 | 421 |
IPR002885 | Pentatricopeptide_rpt | 72 | 118 |
No external refs found! |