Mp7g11060.1 (CYL2, DPB2, ATDPB2)

Aliases : CYL2, DPB2, ATDPB2

Description : non-catalytic component *(Dpb2) of DNA polymerase epsilon complex

Gene families : OG0059773 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp7g11060.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_53

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003678	DNA helicase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004386	helicase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005096	GTPase activator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005524	ATP binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005543	phospholipid binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006269	DNA replication, synthesis of RNA primer	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006298	mismatch repair	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008047	enzyme activator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008270	zinc ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009314	response to radiation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009411	response to UV	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009416	response to light stimulus	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009628	response to abiotic stimulus	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0017076	purine nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0018024	obsolete histone lysine N-methyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030234	enzyme regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030554	adenyl nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030695	GTPase regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030983	mismatched DNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032553	ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032555	purine ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032559	adenyl ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032774	RNA biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035091	phosphatidylinositol binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0036094	small molecule binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0042575	DNA polymerase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043167	ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043168	anion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043169	cation binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043625	delta DNA polymerase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0046872	metal ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0046914	transition metal ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0097367	carbohydrate derivative binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0098772	molecular function regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140677	molecular function activator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:1901265	nucleoside phosphate binding	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR007185	DNA_pol_a/d/e_bsu	277	479
IPR024639	DNA_pol_e_bsu_N	10	67

External Links

No external refs found!

Mp7g11060.1 (CYL2, DPB2, ATDPB2)

Expression Profile

Co-expression Networks

Functional Annotation