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  5. Bra012950

Bra012950 (ATATG3, ATG3)


Aliases : ATATG3, ATG3

Description : autophagosome E2 ATG8-ubiquitin-conjugating enzyme *(ATG3)


Gene families : OG0012257 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra012950
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_207

Target Alias Description ECC score Gene Family Method Actions
Bra028689 ATATG3, ATG3 autophagosome E2 ATG8-ubiquitin-conjugating enzyme *(ATG3) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0019787 ubiquitin-like protein transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamine synthetase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006541 glutamine metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006542 glutamine biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006633 fatty acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0008519 ammonium transmembrane transporter activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016211 ammonia ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016831 carboxy-lyase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016887 ATP hydrolysis activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0050080 malonyl-CoA decarboxylase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Brassica rapa GO terms from Neighborhoods
BP GO:0072488 ammonium transmembrane transport IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR007135 Atg3/Atg10 36 298
No external refs found!