Mp5g16290.1

Description : E3 ubiquitin ligase component *(NSE1) of homologous recombination repair Smc5-Smc6 complex

Gene families : OG0018868 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp5g16290.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_53

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	DNA damage response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0030915	Smc5-Smc6 complex	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0106068	SUMO ligase complex	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000723	telomere maintenance	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005096	GTPase activator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006260	DNA replication	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006471	obsolete protein ADP-ribosylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008047	enzyme activator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016763	pentosyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030695	GTPase regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032200	telomere organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0042575	DNA polymerase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0043015	gamma-tubulin binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043625	delta DNA polymerase complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051276	chromosome organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140677	molecular function activator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011513	Nse1	13	188
IPR014857	Nse1_RING_C4HC3-type	200	242

External Links

No external refs found!

Mp5g16290.1

Expression Profile

Co-expression Networks

Functional Annotation