Mp4g20400.1 (ATO)


Aliases : ATO

Description : component *(SF3A3) of splicing factor 3A complex


Gene families : OG0055171 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp4g20400.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_20


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0001522 pseudouridine synthesis IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0001671 ATPase activator activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003674 molecular_function IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003712 transcription coregulator activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004540 RNA nuclease activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005488 binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008375 acetylglucosaminyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0016592 mediator complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018208 peptidyl-proline modification IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030144 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0031072 heat shock protein binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0051082 unfolded protein binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0051087 protein-folding chaperone binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0060590 ATPase regulator activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140677 molecular function activator activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR031774 SF3A3_dom 128 207
IPR021966 SF3a60_bindingd 82 107
IPR024598 SF3a60/Prp9_C 333 510
No external refs found!