1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp4g20290.1

Mp4g20290.1 (OTP439)


Aliases : OTP439

Description : not classified


Gene families : OG0055161 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp4g20290.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_78


Type GO Term Name Evidence Source
MF GO:0042802 identical protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003677 DNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003678 DNA helicase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003746 translation elongation factor activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003909 DNA ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003911 DNA ligase (NAD+) activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003916 DNA topoisomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004386 helicase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005759 mitochondrial matrix IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006259 DNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006260 DNA replication IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006414 translational elongation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006479 protein methylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008213 protein alkylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016571 histone methylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018022 peptidyl-lysine methylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0018024 obsolete histone lysine N-methyltransferase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0018205 peptidyl-lysine modification IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030684 preribosome IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0031974 membrane-enclosed lumen IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0032040 small-subunit processome IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034968 histone lysine methylation IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043138 3'-5' DNA helicase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043233 organelle lumen IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043414 macromolecule methylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0070013 intracellular organelle lumen IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0070403 NAD+ binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_rpt 716 763
IPR002885 Pentatricopeptide_rpt 298 345
IPR002885 Pentatricopeptide_rpt 368 416
IPR002885 Pentatricopeptide_rpt 577 625
IPR002885 Pentatricopeptide_rpt 476 521
IPR002885 Pentatricopeptide_rpt 235 263
IPR002885 Pentatricopeptide_rpt 440 469
IPR011717 TPR-4 793 812
IPR002885 Pentatricopeptide_rpt 644 675
IPR002885 Pentatricopeptide_rpt 542 570
IPR002885 Pentatricopeptide_rpt 685 710
No external refs found!