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  5. Mp4g13080.1

Mp4g13080.1 (PAF2)


Aliases : PAF2

Description : EC_3.4 hydrolase acting on peptide bond (peptidase). alpha-type-6 component *(PAF) of 26S proteasome


Gene families : OG0054673 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp4g13080.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_62


Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
BP GO:0051603 proteolysis involved in protein catabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0000105 histidine biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0000166 nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003714 transcription corepressor activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003735 structural constituent of ribosome IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003743 translation initiation factor activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003872 6-phosphofructokinase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004055 argininosuccinate synthase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004129 cytochrome-c oxidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004619 phosphoglycerate mutase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004843 cysteine-type deubiquitinase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005047 signal recognition particle binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005048 signal sequence binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005198 structural molecule activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005488 binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005740 mitochondrial envelope IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005742 mitochondrial outer membrane translocase complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005840 ribosome IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006006 glucose metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006007 glucose catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006405 RNA export from nucleus IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006406 mRNA export from nucleus IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006412 translation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006518 peptide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006525 arginine metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006526 arginine biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006547 histidine metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006810 transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006839 mitochondrial transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008135 translation factor activity, RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0008250 oligosaccharyltransferase complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008312 7S RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008443 phosphofructokinase activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008652 amino acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009058 biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0016272 prefoldin complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0017076 purine nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0019200 carbohydrate kinase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0019238 cyclohydrolase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019320 hexose catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0019783 ubiquitin-like protein peptidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030119 AP-type membrane coat adaptor complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030131 clathrin adaptor complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030145 manganese ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0030150 protein import into mitochondrial matrix IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0031967 organelle envelope IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0031975 envelope IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032553 ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032555 purine ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0036094 small molecule binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0042277 peptide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043043 peptide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043167 ion binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043168 anion binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043226 organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043248 proteasome assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043603 amide metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043604 amide biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044249 cellular biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0045182 translation regulator activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046365 monosaccharide catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0048038 quinone binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0048500 signal recognition particle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0050657 nucleic acid transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0050658 RNA transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051028 mRNA transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051168 nuclear export IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051179 localization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051236 establishment of RNA localization IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0051287 NAD binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0051536 iron-sulfur cluster binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0051540 metal cluster binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0065002 intracellular protein transmembrane transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0070585 protein localization to mitochondrion IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071806 protein transmembrane transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072655 establishment of protein localization to mitochondrion IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0097367 carbohydrate derivative binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0098798 mitochondrial protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0098799 outer mitochondrial membrane protein complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0101005 deubiquitinase activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901265 nucleoside phosphate binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901566 organonitrogen compound biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901576 organic substance biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1990542 mitochondrial transmembrane transport IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1990904 ribonucleoprotein complex IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 6 28
IPR001353 Proteasome_sua/b 29 212
No external refs found!