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  5. Mp4g11870.1

Mp4g11870.1


Description : substrate adaptor *(RBV) of CUL4-based E3 ubiquitin ligase complex. regulatory protein *(ATG16) of autophagosome


Gene families : OG0054585 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp4g11870.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_5


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0002097 tRNA wobble base modification IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0002098 tRNA wobble uridine modification IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003689 DNA clamp loader activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003747 translation release factor activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003916 DNA topoisomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004455 ketol-acid reductoisomerase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004650 polygalacturonase activity IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005663 DNA replication factor C complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005739 mitochondrion IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006415 translational termination IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006743 ubiquinone metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006744 ubiquinone biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008079 translation termination factor activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008094 ATP-dependent activity, acting on DNA IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009081 branched-chain amino acid metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016197 endosomal transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0022411 cellular component disassembly IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030127 COPII vesicle coat IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0032984 protein-containing complex disassembly IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0033588 elongator holoenzyme complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0036452 ESCRT complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042180 cellular ketone metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0042181 ketone biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0042393 histone binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0044283 small molecule biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071985 multivesicular body sorting pathway IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901661 quinone metabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901663 quinone biosynthetic process IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR024977 Apc4-like_WD40_dom 181 228
IPR001680 WD40_rpt 52 88
IPR001680 WD40_rpt 93 130
IPR001680 WD40_rpt 263 298
IPR001680 WD40_rpt 12 46
No external refs found!