Mp4g09670.1 (IBI1)

Aliases : IBI1

Description : EC_6.1 ligase forming carbon-oxygen bond. aspartate-tRNA ligase

Gene families : OG0054402 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp4g09670.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_131

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006418	tRNA aminoacylation for protein translation	IEA	Interproscan
BP	GO:0006520	amino acid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0043038	amino acid activation	None	Extended
BP	GO:0043039	tRNA aminoacylation	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0000105	histidine biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003735	structural constituent of ribosome	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003779	actin binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003879	ATP phosphoribosyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003924	GTPase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004055	argininosuccinate synthase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004175	endopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004298	threonine-type endopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004347	glucose-6-phosphate isomerase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004427	inorganic diphosphate phosphatase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004590	orotidine-5'-phosphate decarboxylase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004615	phosphomannomutase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004619	phosphoglycerate mutase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004635	phosphoribosyl-AMP cyclohydrolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005198	structural molecule activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005525	GTP binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005737	cytoplasm	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005839	proteasome core complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005840	ribosome	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0005996	monosaccharide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006006	glucose metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006007	glucose catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006091	generation of precursor metabolites and energy	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006094	gluconeogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006163	purine nucleotide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006206	pyrimidine nucleobase metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006207	'de novo' pyrimidine nucleobase biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006412	translation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006508	proteolysis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006518	peptide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006525	arginine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006526	arginine biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006547	histidine metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006777	Mo-molybdopterin cofactor biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006810	transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006811	monoatomic ion transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006812	monoatomic cation transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006886	intracellular protein transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007010	cytoskeleton organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007155	cell adhesion	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008104	protein localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008233	peptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008652	amino acid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009056	catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009058	biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009059	macromolecule biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009112	nucleobase metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009116	nucleoside metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009117	nucleotide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009226	nucleotide-sugar biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009259	ribonucleotide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0009298	GDP-mannose biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0009678	diphosphate hydrolysis-driven proton transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0015031	protein transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016052	carbohydrate catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016053	organic acid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016192	vesicle-mediated transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0016272	prefoldin complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016462	pyrophosphatase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016763	pentosyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016853	isomerase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016866	intramolecular transferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016872	intramolecular lyase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0017119	Golgi transport complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0018130	heterocycle biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019001	guanyl nucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0019238	cyclohydrolase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019318	hexose metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019319	hexose biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019320	hexose catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019538	protein metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019637	organophosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019673	GDP-mannose metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019693	ribose phosphate metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019720	Mo-molybdopterin cofactor metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019725	cellular homeostasis	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019856	pyrimidine nucleobase biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030117	membrane coat	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030118	clathrin coat	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030119	AP-type membrane coat adaptor complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030125	clathrin vesicle coat	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030131	clathrin adaptor complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030132	clathrin coat of coated pit	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030145	manganese ion binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032324	molybdopterin cofactor biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0032991	protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0033036	macromolecule localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042592	homeostatic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043043	peptide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043228	non-membrane-bounded organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043545	molybdopterin cofactor metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043603	amide metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043604	amide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044249	cellular biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044283	small molecule biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0045184	establishment of protein localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0045454	cell redox homeostasis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046034	ATP metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046112	nucleobase biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046364	monosaccharide biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046365	monosaccharide catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046907	intracellular transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051179	localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051189	prosthetic group metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051234	establishment of localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051641	cellular localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051649	establishment of localization in cell	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0070003	threonine-type peptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0070727	cellular macromolecule localization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071702	organic substance transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071705	nitrogen compound transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0072521	purine-containing compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0072527	pyrimidine-containing compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0098796	membrane protein complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0140535	intracellular protein-containing complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901362	organic cyclic compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901575	organic substance catabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901576	organic substance biosynthetic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901657	glycosyl compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1902494	catalytic complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1902600	proton transmembrane transport	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004365	NA-bd_OB_tRNA	98	179
IPR004364	Aa-tRNA-synt_II	219	538

External Links

No external refs found!

Mp4g09670.1 (IBI1)

Expression Profile

Co-expression Networks

Functional Annotation