Bra012389 (SPDS1)


Aliases : SPDS1

Description : EC_2.5 transferase transferring alkyl or aryl group, other than methyl group


Gene families : OG0001613 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001613_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra012389
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_152


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:0003824 catalytic activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006631 fatty acid metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0009451 RNA modification IEP Brassica rapa GO terms from Neighborhoods
MF GO:0009982 pseudouridine synthase activity IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Brassica rapa GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Brassica rapa GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Brassica rapa GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Brassica rapa GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Brassica rapa GO terms from Neighborhoods
MF GO:0097159 organic cyclic compound binding IEP Brassica rapa GO terms from Neighborhoods
MF GO:1901363 heterocyclic compound binding IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR035246 Spermidine_synt_N 41 95
No external refs found!