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Aliases : RPF6
Description : not classified
Gene families : OG0053770 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp4g01230.1 | |
| Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_20 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0001510 | RNA methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004518 | nuclease activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004519 | endonuclease activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004526 | ribonuclease P activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004549 | tRNA-specific ribonuclease activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004637 | phosphoribosylamine-glycine ligase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005759 | mitochondrial matrix | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005783 | endoplasmic reticulum | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005856 | cytoskeleton | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005885 | Arp2/3 protein complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006066 | alcohol metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006144 | purine nucleobase metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006351 | DNA-templated transcription | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006399 | tRNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006457 | protein folding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0007015 | actin filament organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008033 | tRNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008150 | biological_process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009058 | biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009112 | nucleobase metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009113 | purine nucleobase biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0015629 | actin cytoskeleton | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0015858 | nucleoside transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016093 | polyprenol metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016407 | acetyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016843 | amine-lyase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016844 | strictosidine synthase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016891 | RNA endonuclease activity, producing 5'-phosphomonoesters | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016893 | endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019348 | dolichol metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0019867 | outer membrane | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0030488 | tRNA methylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0030515 | snoRNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0030832 | regulation of actin filament length | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0030833 | regulation of actin filament polymerization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0032271 | regulation of protein polymerization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0032535 | regulation of cellular component size | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0032970 | regulation of actin filament-based process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0033043 | regulation of organelle organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034314 | Arp2/3 complex-mediated actin nucleation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0034457 | Mpp10 complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0034708 | methyltransferase complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043226 | organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043233 | organelle lumen | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043254 | regulation of protein-containing complex assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043527 | tRNA methyltransferase complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0045010 | actin nucleation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046112 | nucleobase biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046855 | obsolete inositol phosphate dephosphorylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0051082 | unfolded protein binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0065008 | regulation of biological quality | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0090066 | regulation of anatomical structure size | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0097435 | supramolecular fiber organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0097747 | RNA polymerase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0106073 | dolichyl pyrophosphate Glc2Man9GlcNAc2 alpha-1,2-glucosyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0110053 | regulation of actin filament organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0110165 | cellular anatomical entity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901264 | carbohydrate derivative transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901642 | nucleoside transmembrane transport | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_rpt | 536 | 584 |
| IPR002885 | Pentatricopeptide_rpt | 395 | 441 |
| IPR002885 | Pentatricopeptide_rpt | 640 | 688 |
| IPR002885 | Pentatricopeptide_rpt | 884 | 931 |
| IPR002885 | Pentatricopeptide_rpt | 445 | 477 |
| IPR002885 | Pentatricopeptide_rpt | 954 | 1002 |
| IPR002885 | Pentatricopeptide_rpt | 710 | 759 |
| IPR002885 | Pentatricopeptide_rpt | 781 | 829 |
| IPR002885 | Pentatricopeptide_rpt | 268 | 313 |
| IPR002885 | Pentatricopeptide_rpt | 846 | 879 |
| IPR002885 | Pentatricopeptide_rpt | 501 | 529 |
| IPR002885 | Pentatricopeptide_rpt | 364 | 393 |
| No external refs found! |