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  5. Mp3g09490.1

Mp3g09490.1 (RPT5A, ATS6A.2)


Aliases : RPT5A, ATS6A.2

Description : regulatory component *(RPT5) of 26S proteasome


Gene families : OG0052436 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Marchantia polymorpha (Mpo) PCC: Mp3g09490.1
Cluster Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_62


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0003924 GTPase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004175 endopeptidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0004298 threonine-type endopeptidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005047 signal recognition particle binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0005048 signal sequence binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005741 mitochondrial outer membrane IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005786 signal recognition particle, endoplasmic reticulum targeting IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0005839 proteasome core complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006405 RNA export from nucleus IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006406 mRNA export from nucleus IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006487 protein N-linked glycosylation IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006605 protein targeting IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006612 protein targeting to membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006613 cotranslational protein targeting to membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006810 transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0006913 nucleocytoplasmic transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0008250 oligosaccharyltransferase complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0008312 7S RNA binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009056 catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0015931 nucleobase-containing compound transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0016579 protein deubiquitination IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0019867 outer membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030117 membrane coat IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030119 AP-type membrane coat adaptor complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030120 vesicle coat IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030126 COPI vesicle coat IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0030131 clathrin adaptor complex IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0030942 endoplasmic reticulum signal peptide binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0031966 mitochondrial membrane IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0031968 organelle outer membrane IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0033218 amide binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0033365 protein localization to organelle IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0042277 peptide binding IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0043021 ribonucleoprotein complex binding IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043248 proteasome assembly IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0045047 protein targeting to ER IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0048038 quinone binding IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0048500 signal recognition particle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0050657 nucleic acid transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0050658 RNA transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051028 mRNA transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051168 nuclear export IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051169 nuclear transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051179 localization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051236 establishment of RNA localization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0051668 localization within membrane IEP Marchantia polymorpha GO terms from Neighborhoods
MF GO:0070003 threonine-type peptidase activity IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0070646 protein modification by small protein removal IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0070972 protein localization to endoplasmic reticulum IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072594 establishment of protein localization to organelle IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0072657 protein localization to membrane IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:0090150 establishment of protein localization to membrane IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0098588 bounding membrane of organelle IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0098796 membrane protein complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:0140535 intracellular protein-containing complex IEP Marchantia polymorpha GO terms from Neighborhoods
BP GO:1901575 organic substance catabolic process IEP Marchantia polymorpha GO terms from Neighborhoods
CC GO:1902494 catalytic complex IEP Marchantia polymorpha GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 208 340
IPR041569 AAA_lid_3 363 407
IPR032501 Prot_ATP_ID_OB_2nd 74 150
No external refs found!