Mp1g27560.1

Description : not classified

Gene families : OG0049419 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Marchantia polymorpha (Mpo) PCC: Mp1g27560.1
Cluster	Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_85

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0001510	RNA methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003724	RNA helicase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003725	double-stranded RNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0004197	cysteine-type endopeptidase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005253	monoatomic anion channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005254	chloride channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005319	lipid transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0005548	phospholipid transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005732	sno(s)RNA-containing ribonucleoprotein complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005811	lipid droplet	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005856	cytoskeleton	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0005885	Arp2/3 protein complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006325	chromatin organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006338	chromatin remodeling	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006364	rRNA processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006820	monoatomic anion transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006821	chloride transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0006869	lipid transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0007015	actin filament organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008186	ATP-dependent activity, acting on RNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008308	voltage-gated monoatomic anion channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008509	monoatomic anion transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008649	rRNA methyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0012511	monolayer-surrounded lipid storage body	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0015629	actin cytoskeleton	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0015748	organophosphate ester transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0015914	phospholipid transport	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016072	rRNA metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016435	rRNA (guanine) methyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0016485	protein processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0022832	voltage-gated channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0022836	gated channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0022839	monoatomic ion gated channel activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0030490	maturation of SSU-rRNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0030515	snoRNA binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0030684	preribosome	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0030832	regulation of actin filament length	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0030833	regulation of actin filament polymerization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0031123	RNA 3'-end processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0031124	mRNA 3'-end processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0031167	rRNA methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0031491	nucleosome binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0032040	small-subunit processome	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032271	regulation of protein polymerization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032535	regulation of cellular component size	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0032970	regulation of actin filament-based process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0033043	regulation of organelle organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034314	Arp2/3 complex-mediated actin nucleation	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0034457	Mpp10 complex	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034470	ncRNA processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0034660	ncRNA metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0036265	RNA (guanine-N7)-methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0042254	ribosome biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0042802	identical protein binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0042803	protein homodimerization activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043226	organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043229	intracellular organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0043254	regulation of protein-containing complex assembly	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044085	cellular component biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0044087	regulation of cellular component biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0045010	actin nucleation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0051087	protein-folding chaperone binding	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051128	regulation of cellular component organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0051493	regulation of cytoskeleton organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0060590	ATPase regulator activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0065008	regulation of biological quality	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0070475	rRNA base methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0070476	rRNA (guanine-N7)-methylation	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071586	CAAX-box protein processing	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071824	protein-DNA complex organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0071840	cellular component organization or biogenesis	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0090066	regulation of anatomical structure size	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0097435	supramolecular fiber organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0097747	RNA polymerase activity	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:0110053	regulation of actin filament organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:0110165	cellular anatomical entity	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140098	catalytic activity, acting on RNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Marchantia polymorpha GO terms from Neighborhoods
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	Marchantia polymorpha GO terms from Neighborhoods
CC	GO:1990904	ribonucleoprotein complex	IEP	Marchantia polymorpha GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR011709	DEAD-box_helicase_OB_fold	930	1010
IPR007502	Helicase-assoc_dom	776	863
IPR001650	Helicase_C	580	712
IPR011545	DEAD/DEAH_box_helicase_dom	326	475
IPR014720	dsRBD_dom	1109	1168

External Links

No external refs found!

Mp1g27560.1

Expression Profile

Co-expression Networks

Functional Annotation