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Aliases : SMD3B
Description : component *(Sm-D3) of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex
Gene families : OG0047996 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Marchantia polymorpha (Mpo) PCC: Mp1g11210.1 | |
| Cluster | Marchantia polymorpha (Mpo) Coexpression Clusters (HCCA Algorithm): Cluster_91 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003743 | translation initiation factor activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0003774 | cytoskeletal motor activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004045 | aminoacyl-tRNA hydrolase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005667 | transcription regulator complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005672 | transcription factor TFIIA complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006082 | organic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006260 | DNA replication | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006325 | chromatin organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006334 | nucleosome assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006338 | chromatin remodeling | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006352 | DNA-templated transcription initiation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006367 | transcription initiation at RNA polymerase II promoter | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006399 | tRNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006487 | protein N-linked glycosylation | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006520 | amino acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008017 | microtubule binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008168 | methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008170 | N-methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0008250 | oligosaccharyltransferase complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008270 | zinc ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0015631 | tubulin binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016043 | cellular component organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0016459 | myosin complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0017076 | purine nucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0022607 | cellular component assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0034728 | nucleosome organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0043169 | cation binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043226 | organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0043933 | protein-containing complex organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0045182 | translation regulator activity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0046872 | metal ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0046914 | transition metal ion binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0065003 | protein-containing complex assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071824 | protein-DNA complex organization | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0110165 | cellular anatomical entity | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| CC | GO:0140534 | endoplasmic reticulum protein-containing complex | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Marchantia polymorpha GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001163 | Sm_dom_euk/arc | 11 | 74 |
| No external refs found! |