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Description : not classified
Gene families : OG0026453 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra011588 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_99 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0008037 | cell recognition | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0016579 | protein deubiquitination | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0048544 | recognition of pollen | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0101005 | deubiquitinase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR032867 | DYW_dom | 732 | 803 |
| IPR002885 | Pentatricopeptide_rpt | 87 | 132 |
| IPR002885 | Pentatricopeptide_rpt | 358 | 384 |
| IPR002885 | Pentatricopeptide_rpt | 190 | 220 |
| IPR002885 | Pentatricopeptide_rpt | 291 | 319 |
| IPR002885 | Pentatricopeptide_rpt | 160 | 189 |
| IPR002885 | Pentatricopeptide_rpt | 386 | 411 |
| IPR002885 | Pentatricopeptide_rpt | 492 | 518 |
| IPR002885 | Pentatricopeptide_rpt | 463 | 486 |
| IPR002885 | Pentatricopeptide_rpt | 529 | 556 |
| IPR002885 | Pentatricopeptide_rpt | 67 | 84 |
| IPR046848 | E_motif | 608 | 669 |
| No external refs found! |