Bra011424

Description : not classified

Gene families : OG0014407 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra011424
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_99

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0000152	nuclear ubiquitin ligase complex	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004176	ATP-dependent peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004252	serine-type endopeptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005680	anaphase-promoting complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_rpt	186	210
IPR002885	Pentatricopeptide_rpt	454	475
IPR002885	Pentatricopeptide_rpt	79	105
IPR002885	Pentatricopeptide_rpt	481	510
IPR002885	Pentatricopeptide_rpt	755	779
IPR046848	E_motif	800	860
IPR032867	DYW_dom	896	988
IPR002885	Pentatricopeptide_rpt	378	423
IPR002885	Pentatricopeptide_rpt	681	728
IPR002885	Pentatricopeptide_rpt	579	625

External Links

No external refs found!