Bra011295 (ARF3, ARL1, ATARL1)

Aliases : ARF3, ARL1, ATARL1

Description : ARF-GTPase *(ARFE)

Gene families : OG0008139 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra011295
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_74

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000295	adenine nucleotide transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004827	proline-tRNA ligase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005096	GTPase activator activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005215	transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005346	purine ribonucleotide transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005347	ATP transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0005471	ATP:ADP antiporter activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0005737	cytoplasm	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006399	tRNA metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006725	cellular aromatic compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006807	nitrogen compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006862	nucleotide transport	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008047	enzyme activator activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0008150	biological_process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008234	cysteine-type peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015078	proton transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015215	nucleotide transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015216	purine nucleotide transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015217	ADP transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015297	antiporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015605	organophosphate ester transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015748	organophosphate ester transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0015931	nucleobase-containing compound transport	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0016469	proton-transporting two-sector ATPase complex	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0016471	vacuolar proton-transporting V-type ATPase complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0016579	protein deubiquitination	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016874	ligase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0019439	aromatic compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0022804	active transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0022857	transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0030695	GTPase regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0033176	proton-transporting V-type ATPase complex	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0034660	ncRNA metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043038	amino acid activation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0043039	tRNA aminoacylation	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044248	cellular catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0044281	small molecule metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046434	organophosphate catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046483	heterocycle metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0046700	heterocycle catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0047429	nucleoside triphosphate diphosphatase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0070646	protein modification by small protein removal	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0101005	deubiquitinase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140677	molecular function activator activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901292	nucleoside phosphate catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901360	organic cyclic compound metabolic process	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:1901702	salt transmembrane transporter activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:1902600	proton transmembrane transport	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:1904949	ATPase complex	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	5	176

External Links

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Bra011295 (ARF3, ARL1, ATARL1)

Expression Profile

Co-expression Networks

Functional Annotation