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  5. Spov3_chr6.00898

Spov3_chr6.00898


Description : not classified


Gene families : OG0065371 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr6.00898
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_112


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003993 acid phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004180 carboxypeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004185 serine-type carboxypeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004814 arginine-tRNA ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005737 cytoplasm IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006420 arginyl-tRNA aminoacylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010215 cellulose microfibril organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016052 carbohydrate catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016161 beta-amylase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016791 phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0030198 extracellular matrix organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043062 extracellular structure organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070008 serine-type exopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR024977 Apc4-like_WD40_dom 303 353
IPR001680 WD40_rpt 144 167
IPR001680 WD40_rpt 173 209
IPR001680 WD40_rpt 89 124
IPR001680 WD40_rpt 258 295
No external refs found!