Spov3_chr6.00259

Description : not classified

Gene families : OG0064960 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr6.00259
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_52

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004842	ubiquitin-protein transferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005737	cytoplasm	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0007275	multicellular organism development	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008150	biological_process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009057	macromolecule catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016567	protein ubiquitination	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016755	aminoacyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019787	ubiquitin-like protein transferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0030001	metal ion transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032446	protein modification by small protein conjugation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032501	multicellular organismal process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0032502	developmental process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0040008	regulation of growth	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0045927	positive regulation of growth	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048518	positive regulation of biological process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0048856	anatomical structure development	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	181	410
IPR041118	Rx_N	21	105

External Links

No external refs found!

Spov3_chr6.00259

Expression Profile

Co-expression Networks

Functional Annotation