1. Home
  2. Species
  3. Brassica rapa
  4. Sequence
  5. Bra011212

Bra011212 (MEF29)


Aliases : MEF29

Description : RNA editing factor *(MEF29)


Gene families : OG0001216 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brassica rapa (Bra) PCC: Bra011212
Cluster Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_99

Target Alias Description ECC score Gene Family Method Actions
Bra014564 No alias not classified 0.01 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Bra024048 MEF29 RNA editing factor *(MEF29) 0.02 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Brassica rapa GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Brassica rapa GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR046849 Eplus_motif 661 683
IPR032867 DYW_dom 691 783
IPR002885 Pentatricopeptide_rpt 284 313
IPR002885 Pentatricopeptide_rpt 187 216
IPR002885 Pentatricopeptide_rpt 86 112
IPR002885 Pentatricopeptide_rpt 163 185
IPR002885 Pentatricopeptide_rpt 486 534
IPR002885 Pentatricopeptide_rpt 388 433
No external refs found!