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  5. Spov3_chr5.04410

Spov3_chr5.04410


Description : not classified


Gene families : OG0002568 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002568_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr5.04410
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_39

Target Alias Description ECC score Gene Family Method Actions
Spov3_S10.00014 AtLARP6b, LARP6b not classified 0.06 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr2.05430 TPPJ not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr3.01192 TPPJ not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol
Spov3_chr5.04411 No alias not classified 0.04 OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042545 cell wall modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0052689 carboxylic ester hydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071554 cell wall organization or biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071555 cell wall organization IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR002156 RNaseH_domain 4 28
No external refs found!