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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Light: 260 uE m-2 s-1 | Light: 195 uE m-2 s-1 | Light: 130 uE m-2 s-1 (Control) | Light: 65 uE m-2 s-1 | Photoperiod: L24 | Photoperiod: L18D6 | Photoperiod: L13D11 (Control) | Photoperiod: L8D16 | RBW: 4:1:1 (Control) | RBW: 4:1:0 | RBW: 3:1:1 | RBW: 3:1:0 | Nitrogen: 0% | Nitrogen: 25% | Nitrogen: 50% | Nitrogen: 100% (Control) | Nitrogen: 150% | Phosphorous: 0% | Phosphorous: 25% | Phosphorous: 50% | Phosphorous: 100% (Control) | Phosphorous: 150% | Potassium: 0% | Potassium: 25% | Potassium: 50% | Potassium: 100% (Control) | Potassium: 150% | Temperature: 20°C (Control) | Temperature: 25°C | Temperature: 30°C |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -1.61 | -0.41 | -0.94 | -1.64 | -1.49 | -0.38 | -2.09 | -2.14 | -1.06 | -0.33 | -0.71 | -0.81 | -0.08 | 0.15 | -0.69 | -0.69 | -0.45 | -0.99 | -3.35 | -3.63 | -1.42 | -0.25 | 3.92 | -2.15 | -1.31 | -1.01 | -2.5 | -1.12 | -0.91 | -0.61 | |
Spov3_C0124.00002 (UBP1C) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - |
Spov3_chr1.00060 (mtHsc70-1) | 0.03 | -0.17 | -1.93 | -0.77 | 0.46 | -0.14 | -0.9 | -0.45 | -0.08 | 0.3 | 0.19 | -0.13 | 0.59 | 0.11 | -1.05 | 0.01 | -0.22 | -0.34 | -0.86 | -0.52 | -0.82 | -0.58 | 2.39 | 0.12 | -0.49 | -0.11 | -1.05 | 0.0 | -0.16 | -0.15 |
Spov3_chr1.00596 (LecRK-I.2) | - | - | - | - | - | -2.54 | -2.22 | -2.08 | - | - | - | - | - | - | - | - | -0.46 | 3.19 | - | - | - | - | 4.2 | - | - | - | - | - | - | 0.16 |
| 0.98 | 0.93 | -1.55 | -1.47 | -1.54 | -0.73 | -3.89 | -1.61 | -2.3 | -0.88 | -3.27 | -2.11 | 0.03 | -0.5 | -1.68 | -2.24 | -1.68 | 2.4 | -1.48 | -2.34 | -0.97 | -1.86 | 3.39 | -1.3 | -4.0 | -2.34 | -2.29 | -0.61 | -1.84 | 0.63 | |
| 0.76 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - | - | 4.76 | - | - | - | - | - | - | - | |
Spov3_chr1.01825 (CNI1) | -2.59 | - | - | - | -0.15 | 0.14 | -1.69 | -0.58 | -1.73 | -2.91 | - | -2.98 | 0.03 | 0.31 | -0.96 | -1.27 | -1.2 | 1.63 | - | -0.14 | 0.47 | 0.43 | 3.88 | -1.7 | -2.91 | -0.65 | - | - | - | -2.83 |
| 1.97 | 0.34 | - | 0.25 | 0.21 | - | - | 0.1 | - | - | - | - | - | - | - | 0.46 | - | - | - | - | - | - | 4.02 | - | - | - | - | 1.43 | 0.16 | - | |
Spov3_chr1.02056 (PBS1) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - |
Spov3_chr1.02168 (ABS7) | -3.21 | -0.22 | -0.66 | -0.97 | -0.75 | -2.48 | -0.33 | -0.99 | -0.83 | -3.32 | -0.2 | -1.89 | -1.3 | -0.56 | -1.46 | -0.04 | - | -1.95 | -0.28 | -2.01 | -0.11 | -0.45 | 3.77 | -3.18 | 0.05 | -0.15 | - | -0.14 | -0.69 | 0.47 |
Spov3_chr1.04536 (SKS1) | -3.56 | -3.34 | - | - | -1.47 | -2.07 | -3.59 | - | - | -2.25 | -1.19 | - | -0.95 | - | - | - | - | -0.74 | -3.34 | - | - | -3.6 | 4.74 | - | -2.52 | - | - | - | -3.48 | -2.06 |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.73 | - | - | - | - | - | - | - | 4.64 | - | - | - | - | - | 1.79 | - | |
Spov3_chr2.00265 (LEA4-1) | -2.78 | - | -1.95 | -1.58 | -0.04 | -0.57 | -1.46 | -1.27 | - | -2.01 | - | -3.02 | -0.54 | -0.27 | -2.11 | -2.68 | -0.01 | 0.02 | -0.28 | -0.38 | -0.86 | -0.84 | 4.19 | -0.65 | -2.94 | -3.25 | -2.18 | -1.82 | -3.1 | -3.09 |
Spov3_chr2.00365 (CTN) | -3.88 | -2.06 | -1.72 | -2.41 | -1.25 | -3.36 | - | -2.08 | -2.42 | -4.23 | -2.6 | -1.71 | -2.16 | - | -1.52 | -3.08 | -3.27 | -0.58 | - | -4.46 | - | -2.43 | 4.61 | -0.98 | -4.36 | -4.45 | -2.76 | -1.33 | -4.06 | -1.03 |
Spov3_chr2.00541 (LARP6b) | -0.52 | -1.46 | - | -1.5 | 1.1 | -2.03 | - | - | - | - | - | -2.46 | - | 1.44 | -2.54 | - | - | -3.2 | - | -1.01 | -2.82 | -2.61 | 4.2 | -0.36 | -1.53 | - | -1.91 | - | 0.19 | 0.45 |
| - | -0.18 | -0.96 | - | - | - | - | 0.01 | 0.44 | 0.91 | - | - | -1.04 | - | 0.24 | - | - | 1.75 | -1.27 | - | - | - | 4.12 | - | - | - | - | - | -0.87 | 0.01 | |
Spov3_chr2.00584 (OTP82) | - | - | - | - | - | - | - | - | - | - | - | - | 2.98 | - | - | - | - | - | - | - | - | - | 4.47 | - | - | - | - | - | - | - |
| -0.18 | -0.06 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.56 | - | - | - | - | 4.61 | - | - | - | - | - | - | -0.35 | |
Spov3_chr2.02015 (LCR62) | -0.24 | -0.2 | -1.35 | -0.34 | -0.78 | -0.83 | - | - | - | -2.04 | -0.5 | -2.15 | 0.31 | -0.07 | - | -1.79 | - | 1.54 | - | -0.38 | 0.8 | -2.39 | 3.83 | -2.33 | - | -1.28 | 0.06 | - | - | -0.33 |
Spov3_chr2.02268 (CRM1B) | -1.52 | -3.53 | -2.45 | -3.03 | -2.16 | -2.28 | -3.48 | -2.92 | -3.33 | -2.93 | -2.92 | -1.92 | -0.88 | -1.42 | -3.44 | -3.18 | -3.62 | 0.03 | -2.9 | -5.58 | -2.72 | -2.51 | 4.6 | -4.45 | -3.07 | -3.86 | -4.54 | -1.91 | -1.7 | -2.5 |
Spov3_chr2.02298 (DSI-1VOC) | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - |
| -0.34 | -0.14 | -0.72 | -0.87 | -0.71 | 0.21 | -0.63 | -0.06 | -0.81 | -0.18 | -1.94 | -1.0 | -0.27 | 0.14 | -0.62 | 0.03 | -0.88 | 1.4 | -1.46 | -0.66 | -0.45 | -1.63 | 2.53 | 0.41 | -1.69 | -0.2 | -0.86 | -0.21 | -0.12 | 1.07 | |
| -0.52 | 1.89 | - | -18.67 | - | - | - | -16.4 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.39 | - | - | - | - | 2.23 | - | - | |
| -1.74 | -1.15 | -6.29 | -4.84 | -2.09 | -2.4 | -4.65 | -6.12 | -6.28 | -2.85 | - | -4.61 | -1.05 | -4.03 | -3.34 | -6.21 | -3.76 | 2.6 | - | -5.12 | -3.71 | -3.28 | 4.12 | -2.4 | -5.05 | -2.74 | -4.5 | -2.75 | -2.39 | 1.75 | |
Spov3_chr2.03916 (GEX1) | -0.6 | -1.58 | 0.38 | -0.69 | 0.15 | - | -0.43 | -3.1 | 0.16 | - | -2.11 | -1.72 | -3.22 | -2.39 | -1.82 | -3.28 | -3.21 | -0.65 | -0.19 | -1.84 | -1.2 | -0.7 | 3.89 | -2.37 | -2.46 | -1.09 | -0.62 | 0.33 | -0.12 | 0.42 |
| -1.25 | -0.93 | -2.21 | -1.84 | -0.87 | -3.11 | -2.04 | -1.95 | -3.0 | -2.24 | -3.49 | -1.32 | -1.35 | 0.32 | -1.36 | -1.4 | -0.42 | 2.54 | -1.59 | -2.45 | -2.25 | -3.81 | 3.82 | -4.72 | -1.42 | -1.55 | -3.2 | -1.17 | -1.0 | -0.12 | |
Spov3_chr2.05003 (GAF1) | - | - | - | - | - | - | - | - | - | - | - | - | -3.91 | - | - | - | - | -0.13 | - | - | - | - | 4.86 | - | - | - | - | -4.71 | - | - |
| -1.8 | -1.78 | - | - | - | -1.1 | -0.95 | - | - | 0.35 | - | -1.04 | 0.48 | - | - | - | - | 2.46 | - | - | - | - | 3.75 | -0.76 | - | -1.9 | - | 0.55 | 1.02 | 0.99 | |
| 0.0 | -0.07 | -0.85 | -0.22 | -0.7 | -1.52 | -1.28 | -0.24 | -1.0 | -0.72 | -0.97 | -0.69 | -1.02 | -0.73 | -1.46 | -1.29 | -0.23 | -1.17 | -2.49 | -3.29 | -0.63 | -0.47 | 3.8 | -0.61 | -0.76 | -1.55 | -0.27 | -2.22 | -1.38 | -1.45 | |
Spov3_chr3.00690 (GEX1) | - | - | -0.69 | - | - | - | -1.04 | - | -0.96 | - | - | - | - | 0.67 | 1.85 | - | - | - | - | - | - | - | 4.26 | - | -1.03 | - | 1.13 | 0.44 | - | - |
| - | - | - | - | -0.13 | - | - | - | - | - | - | - | - | - | - | - | - | -0.79 | - | 0.79 | - | - | 4.74 | - | - | - | - | - | - | - | |
Spov3_chr3.00981 (GH3.3) | -2.37 | -2.92 | -4.56 | -2.53 | -2.55 | -3.24 | -3.37 | -3.96 | -3.61 | -3.52 | -3.95 | -4.62 | -0.17 | -3.62 | -5.66 | -3.34 | -5.06 | 2.89 | -4.52 | -4.49 | -5.14 | -4.13 | 4.25 | -3.89 | -3.63 | -3.0 | -2.94 | -1.6 | -2.68 | -4.1 |
Spov3_chr3.01693 (ABR1) | -0.98 | -2.52 | -2.49 | -1.52 | -0.98 | -0.48 | -0.64 | -0.42 | -0.94 | -2.06 | -0.99 | -1.75 | -0.57 | -0.64 | -0.19 | -0.31 | -0.41 | -0.92 | -1.26 | -1.73 | -1.82 | -1.25 | 3.92 | -1.43 | -1.07 | -0.94 | -0.79 | -1.16 | -0.74 | -0.33 |
Spov3_chr3.01701 (MGO1) | 0.37 | -0.18 | -0.15 | -1.16 | -0.48 | -0.85 | -0.4 | -0.88 | -1.46 | -0.34 | -1.69 | -1.75 | -1.33 | 0.41 | -1.01 | -0.71 | -0.66 | -0.32 | -1.34 | -1.15 | -0.52 | -0.72 | 3.39 | -0.82 | -0.71 | -0.06 | -0.43 | -0.19 | -0.63 | -0.25 |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | |
| - | - | - | - | -0.88 | - | - | - | - | - | - | - | - | - | -0.65 | - | - | 2.54 | - | - | - | - | 4.45 | - | - | - | - | - | - | 0.16 | |
| - | - | - | - | -0.88 | - | - | - | - | - | - | - | - | - | -0.65 | - | - | 2.54 | - | - | - | - | 4.45 | - | - | - | - | - | - | 0.16 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | -0.6 | -0.27 | - | - | -0.67 | 4.79 | -2.16 | - | - | - | - | - | - | |
Spov3_chr3.03293 (ARFB1C) | -2.7 | -1.75 | - | -1.34 | -1.71 | -1.66 | -3.03 | -0.13 | -0.9 | -1.49 | - | -1.64 | -0.52 | 0.45 | -3.28 | -3.01 | - | 1.55 | - | -1.09 | -2.97 | 0.09 | 4.19 | -3.11 | -1.36 | - | -2.13 | - | -2.86 | -2.1 |
| -4.47 | -1.68 | -1.98 | -4.55 | -2.69 | -0.89 | -2.59 | -2.12 | -1.86 | -1.13 | -2.21 | -3.44 | -1.55 | -0.43 | -2.23 | - | -1.48 | 1.16 | -2.2 | -2.03 | - | -3.11 | 4.44 | -2.31 | -3.51 | -4.74 | -3.41 | -1.64 | -3.08 | -3.04 | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | |
Spov3_chr3.04568 (WRKY23) | -0.35 | -0.7 | -0.72 | -0.83 | -0.36 | -0.49 | -0.58 | -0.81 | -0.69 | -1.59 | -1.02 | -1.38 | 0.17 | 0.43 | -0.0 | -0.42 | -0.69 | 1.94 | -1.47 | -1.67 | -1.16 | -1.16 | 3.09 | -0.98 | -0.91 | -1.18 | -1.29 | -1.06 | -0.73 | 0.18 |
Spov3_chr3.04815 (CXE18) | -4.76 | - | -3.79 | - | -5.08 | - | - | - | -4.2 | -4.25 | -4.79 | -5.9 | - | - | -5.87 | -5.71 | -5.88 | 0.49 | -4.07 | - | -5.19 | -6.01 | 4.81 | - | - | -3.9 | -5.71 | - | -4.21 | -5.84 |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.4 | - | 4.43 | - | 1.55 | - | - | - | 1.52 | - | |
Spov3_chr3.04881 (GBSS1) | - | - | - | - | -1.96 | -1.97 | - | - | -2.58 | - | -2.71 | -2.93 | - | -1.83 | - | - | - | -0.21 | - | - | - | -1.5 | 4.78 | - | - | - | - | - | - | - |
| - | - | - | - | - | - | -2.38 | - | - | - | - | - | -1.58 | - | - | - | - | - | - | - | - | - | 4.87 | - | - | - | - | - | - | -2.69 | |
Spov3_chr4.00783 (PRX52) | - | - | 0.26 | - | - | -0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.74 | - | - | - | - | - | 0.25 | - |
Spov3_chr4.01103 (ART1) | - | -1.87 | - | - | - | - | - | - | - | - | - | - | 0.64 | - | - | - | - | 0.79 | - | - | -2.06 | - | 4.71 | - | - | - | - | - | - | - |
| -0.52 | 1.89 | - | -18.67 | - | - | - | -16.4 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.39 | - | - | - | - | 2.23 | - | - | |
Spov3_chr4.01314 (NPH3) | -1.23 | -0.02 | -0.4 | - | -1.49 | -0.71 | - | -1.35 | - | -3.26 | - | -1.06 | 0.3 | -0.12 | -1.17 | -2.32 | -0.36 | 1.25 | -0.89 | -1.24 | -1.46 | -2.52 | 3.75 | -0.6 | -3.55 | -2.33 | -1.48 | -2.07 | -1.73 | 1.64 |
| - | -0.83 | - | - | - | - | - | - | 1.18 | 0.61 | 0.2 | -0.07 | -2.85 | - | - | - | - | -0.21 | - | - | -1.03 | -1.24 | 4.37 | - | - | - | - | - | -1.04 | -1.17 | |
| -0.04 | 0.09 | -0.91 | -1.77 | -1.37 | -1.44 | -1.91 | -1.84 | -0.99 | -0.15 | -0.93 | -0.64 | 0.09 | -0.72 | -3.57 | - | -0.72 | 0.15 | -1.53 | -2.37 | -0.75 | -0.29 | 3.64 | -0.52 | -0.54 | -0.51 | -0.32 | 0.59 | -1.18 | -0.99 | |
| -0.5 | -3.27 | -1.28 | -0.58 | 0.07 | -0.57 | -2.6 | -0.25 | -2.47 | -2.39 | -0.15 | -1.88 | -0.15 | -2.4 | -1.55 | -2.13 | -2.27 | 2.33 | -0.65 | -1.59 | -1.11 | -2.55 | 3.58 | -1.49 | -1.41 | -1.29 | 0.15 | -0.77 | -1.38 | -2.51 | |
Spov3_chr4.03729 (PES1) | -0.3 | -0.42 | -0.65 | -0.37 | -0.78 | -0.66 | -1.38 | -1.04 | -0.47 | -0.0 | -1.15 | -0.47 | -0.15 | -0.26 | -0.67 | -1.51 | -0.44 | 0.49 | -2.18 | -1.37 | -0.81 | -1.34 | 3.42 | -0.05 | -0.48 | -0.39 | -0.71 | -1.09 | -0.46 | -0.53 |
Spov3_chr4.04022 (WRKY72) | -2.97 | - | -4.26 | - | -1.75 | -5.52 | - | -2.98 | -5.16 | - | - | - | -1.76 | -1.55 | -3.54 | - | - | 0.9 | - | - | -5.44 | - | 4.73 | -5.5 | -3.13 | - | - | - | -5.38 | - |
Spov3_chr4.04327 (DIN6) | -0.44 | -0.7 | -0.97 | -0.88 | -0.83 | -0.27 | -0.38 | -0.08 | -0.7 | -0.26 | -0.85 | -1.03 | -0.89 | -0.73 | -0.76 | -0.47 | -0.69 | -0.52 | -0.28 | -0.73 | -0.16 | -0.27 | 3.37 | -0.49 | -0.46 | -0.45 | -0.59 | -0.61 | -0.76 | -0.66 |
Spov3_chr5.02278 (ENODL14) | -0.12 | 0.07 | -2.11 | -1.57 | -0.76 | -2.21 | -1.17 | -0.51 | -0.88 | -0.35 | -3.66 | -1.42 | -1.99 | -1.62 | 0.13 | -1.59 | -1.23 | -0.67 | -0.41 | -1.79 | -1.77 | -2.81 | 3.98 | -1.09 | 0.02 | -2.76 | -1.67 | -0.13 | -1.88 | -2.12 |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | |
| - | - | - | - | - | - | - | - | - | - | - | - | 1.92 | - | - | - | - | - | - | - | - | - | 4.43 | - | - | - | - | 0.79 | - | 1.56 | |
Spov3_chr6.00064 (GPAT2) | -0.85 | 1.22 | - | - | - | -0.1 | -0.19 | 0.11 | - | - | - | 0.98 | - | - | - | - | - | 1.4 | - | - | - | - | 4.09 | - | - | - | - | - | 0.62 | 0.08 |
Spov3_chr6.00678 (VBF) | -1.58 | -4.1 | - | - | -1.89 | -2.96 | -2.66 | - | - | -3.29 | - | - | -1.66 | -0.69 | -2.85 | -3.18 | - | 0.57 | - | - | - | - | 4.72 | - | - | - | - | - | - | - |
Spov3_chr6.00718 (Haspin) | - | - | - | - | -1.04 | - | - | - | - | - | - | - | - | - | - | - | - | 1.66 | - | - | - | - | 4.72 | - | - | - | - | - | - | - |
Spov3_chr6.00719 (CYP72A9) | - | - | - | - | -1.33 | - | - | - | -1.59 | - | - | - | - | -1.65 | - | - | - | -0.78 | - | - | - | - | 4.83 | - | - | - | - | - | - | - |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | |
Spov3_chr6.01668 (DTWD2A) | - | - | -0.23 | - | - | - | -0.43 | - | -0.67 | -0.84 | - | -1.9 | 0.01 | 0.43 | -0.4 | - | 0.08 | 0.42 | - | - | - | -0.91 | 4.25 | -1.79 | -0.91 | - | -2.02 | - | -1.8 | -0.77 |
| -0.52 | 1.89 | - | -18.67 | - | - | - | -16.4 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.39 | - | - | - | - | 2.23 | - | - | |
Spov3_chr6.02321 (CYP81D5) | - | - | - | - | - | - | - | - | - | - | 1.91 | - | 1.95 | - | - | - | - | - | - | - | - | - | 4.48 | - | - | - | - | - | - | - |
| - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 4.91 | - | - | - | - | - | - | - | |
Spov3_chr6.03012 (AAE1) | -0.25 | -1.99 | 0.58 | - | -0.85 | -2.29 | - | 0.01 | - | -1.13 | - | - | -0.1 | -0.27 | -0.28 | -1.12 | -2.09 | 1.34 | - | -1.3 | -1.19 | - | 4.11 | - | - | -1.42 | -2.08 | - | - | -0.6 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.