Spov3_chr5.03639 (CRR42)

Aliases : CRR42

Description : assembly factor CRR42 involved in NDH complex assembly

Gene families : OG0072166 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr5.03639
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_102

Type	GO Term	Name	Evidence	Source
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010257	NADH dehydrogenase complex assembly	None	Extended
BP	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly	IEA	Interproscan
BP	GO:0010275	NAD(P)H dehydrogenase complex assembly	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002097	tRNA wobble base modification	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0002100	tRNA wobble adenosine to inosine editing	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003824	catalytic activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004000	adenosine deaminase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004345	glucose-6-phosphate dehydrogenase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004525	ribonuclease III activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004556	alpha-amylase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004809	tRNA (guanine-N2-)-methyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0005975	carbohydrate metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006006	glucose metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006325	chromatin organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006338	chromatin remodeling	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006382	adenosine to inosine editing	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006396	RNA processing	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006399	tRNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006400	tRNA modification	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008033	tRNA processing	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0008152	metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008170	N-methyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008175	tRNA methyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008251	tRNA-specific adenosine deaminase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016160	amylase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016423	tRNA (guanine) methyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016553	base conversion or substitution editing	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016787	hydrolase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016853	isomerase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016866	intramolecular transferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016868	intramolecular transferase activity, phosphotransferases	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0019239	deaminase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019318	hexose metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034470	ncRNA processing	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034660	ncRNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044238	primary metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0046855	obsolete inositol phosphate dephosphorylation	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051743	red chlorophyll catabolite reductase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071704	organic substance metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071824	protein-DNA complex organization	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0140673	transcription elongation-coupled chromatin remodeling	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR021495	CRR42-like	70	132

External Links

No external refs found!

Spov3_chr5.03639 (CRR42)

Expression Profile

Co-expression Networks

Functional Annotation