Spov3_chr5.02753 (AtLARP6b, LARP6b)


Aliases : AtLARP6b, LARP6b

Description : regulatory protein *(LARP6) of mRNA quality control


Gene families : OG0009997 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr5.02753
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_30


Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006352 DNA-templated transcription initiation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006354 DNA-templated transcription elongation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006368 transcription elongation by RNA polymerase II IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0008023 transcription elongation factor complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009690 cytokinin metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010817 regulation of hormone levels IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016301 kinase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016570 histone modification IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016593 Cdc73/Paf1 complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016866 intramolecular transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018208 peptidyl-proline modification IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019139 cytokinin dehydrogenase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0031179 peptide modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042445 hormone metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051213 dioxygenase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR006630 La_HTH 48 103
IPR000504 RRM_dom 133 206
No external refs found!