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  5. Spov3_chr5.02474

Spov3_chr5.02474 (PNH, AGO10, ZLL)


Aliases : PNH, AGO10, ZLL

Description : not classified


Gene families : OG0000113 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000113_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr5.02474
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_26


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000469 obsolete cleavage involved in rRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003774 cytoskeletal motor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003777 microtubule motor activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006536 glutamate metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006537 glutamate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006810 transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007017 microtubule-based process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007018 microtubule-based movement IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008652 amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009064 glutamine family amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015299 obsolete solute:proton antiporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015930 glutamate synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016020 membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016053 organic acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019842 vitamin binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030170 pyridoxal phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043015 gamma-tubulin binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043648 dicarboxylic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046394 carboxylic acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051179 localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0055085 transmembrane transport IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070279 vitamin B6 binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140657 ATP-dependent activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901605 alpha-amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901607 alpha-amino acid biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003165 Piwi 616 935
IPR032474 Argonaute_N 97 231
IPR032472 ArgoL2 469 513
IPR003100 PAZ_dom 331 457
IPR032473 Argonaute_Mid_dom 524 601
IPR014811 ArgoL1 242 282
No external refs found!