Spov3_chr5.00994 (PUB33)

Aliases : PUB33

Description : E3 ubiquitin protein ligase *(PUB32). EC_2.7 transferase transferring phosphorus-containing group

Gene families : OG0001368 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001368_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr5.00994
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_30

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0000295	adenine nucleotide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003677	DNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003968	RNA-dependent RNA polymerase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004652	obsolete polynucleotide adenylyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004673	protein histidine kinase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005346	purine ribonucleotide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005347	ATP transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005471	ATP:ADP antiporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005488	binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0005515	protein binding	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005634	nucleus	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005667	transcription regulator complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005669	transcription factor TFIID complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006355	regulation of DNA-templated transcription	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006862	nucleotide transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0008514	organic anion transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009719	response to endogenous stimulus	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009725	response to hormone	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009889	regulation of biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010033	response to organic substance	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010468	regulation of gene expression	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015215	nucleotide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015216	purine nucleotide transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015217	ADP transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015605	organophosphate ester transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015748	organophosphate ester transport	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0015931	nucleobase-containing compound transport	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016151	nickel cation binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0016779	nucleotidyltransferase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019222	regulation of metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0019627	urea metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030120	vesicle coat	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0030127	COPII vesicle coat	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031323	regulation of cellular metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0035550	urease complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042221	response to chemical	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043227	membrane-bounded organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043419	urea catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043605	amide catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0043631	obsolete RNA polyadenylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0044282	small molecule catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050789	regulation of biological process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0050794	regulation of cellular process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051252	regulation of RNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0065007	biological regulation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0071941	nitrogen cycle metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0080090	regulation of primary metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0140299	small molecule sensor activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	1570	1640
IPR003613	Ubox_domain	648	717
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	377	618
IPR001245	Ser-Thr/Tyr_kinase_cat_dom	1296	1540

External Links

No external refs found!

Spov3_chr5.00994 (PUB33)

Expression Profile

Co-expression Networks

Functional Annotation