- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PARL1, NUC-L1, ATNUC-L1, NUC1
Description : regulatory protein *(NCL) of rRNA transcription
Gene families : OG0072371 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr5.00748 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_116 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003922 | GMP synthase (glutamine-hydrolyzing) activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004177 | aminopeptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005525 | GTP binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0005730 | nucleolus | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0005759 | mitochondrial matrix | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006177 | GMP biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006364 | rRNA processing | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008097 | 5S rRNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008134 | transcription factor binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0008150 | biological_process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008168 | methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008235 | metalloexopeptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009123 | nucleoside monophosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009124 | nucleoside monophosphate biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009126 | purine nucleoside monophosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009127 | purine nucleoside monophosphate biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009156 | ribonucleoside monophosphate biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009161 | ribonucleoside monophosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009167 | purine ribonucleoside monophosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009168 | purine ribonucleoside monophosphate biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016072 | rRNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0017076 | purine nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0019843 | rRNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0030145 | manganese ion binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0030684 | preribosome | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0032040 | small-subunit processome | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0034457 | Mpp10 complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0034470 | ncRNA processing | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0042254 | ribosome biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043226 | organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043229 | intracellular organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043233 | organelle lumen | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044085 | cellular component biogenesis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0046037 | GMP metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0070006 | metalloaminopeptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0110165 | cellular anatomical entity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| No external refs found! |