- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : ROC1
Description : peptidyl-prolyl cis-trans isomerase *(ROC1/2/3). EC_5.2 cis-trans-isomerase
Gene families : OG0015534 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Sequence : coding (downloadCreate heatmap
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brassica rapa (Bra) PCC: Bra010728 | |
| Cluster | Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_166 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000413 | protein peptidyl-prolyl isomerization | IEA | Interproscan |
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0003993 | acid phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | Brassica rapa GO terms from Neighborhoods |
| CC | GO:0005737 | cytoplasm | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006308 | DNA catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006534 | cysteine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0006629 | lipid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0008289 | lipid binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009069 | serine family amino acid metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0009092 | homoserine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010035 | response to inorganic substance | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0010167 | response to nitrate | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015074 | DNA integration | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015706 | nitrate transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0015858 | nucleoside transport | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016787 | hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0016791 | phosphatase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0019346 | transsulfuration | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0043169 | cation binding | IEP | Brassica rapa GO terms from Neighborhoods |
| MF | GO:0046872 | metal ion binding | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0050667 | homocysteine metabolic process | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:0098661 | inorganic anion transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901642 | nucleoside transmembrane transport | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901698 | response to nitrogen compound | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1901700 | response to oxygen-containing compound | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1902025 | nitrate import | IEP | Brassica rapa GO terms from Neighborhoods |
| BP | GO:1902074 | response to salt | IEP | Brassica rapa GO terms from Neighborhoods |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002130 | Cyclophilin-type_PPIase_dom | 7 | 169 |
| No external refs found! |