Spov3_chr4.04520 (Drg1-3)

Aliases : Drg1-3

Description : not classified

Gene families : OG0004670 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0004670_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Spinacia oleracea (Sol) PCC: Spov3_chr4.04520
Cluster	Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_135

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000502	proteasome complex	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003723	RNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003729	mRNA binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0004827	proline-tRNA ligase activity	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0005575	cellular_component	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006397	mRNA processing	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0009894	regulation of catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016070	RNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0016071	mRNA metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:0035145	exon-exon junction complex	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0042176	regulation of protein catabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0051246	regulation of protein metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051536	iron-sulfur cluster binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Spinacia oleracea GO terms from Neighborhoods
MF	GO:0051540	metal cluster binding	IEP	Spinacia oleracea GO terms from Neighborhoods
BP	GO:0090304	nucleic acid metabolic process	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1905368	peptidase complex	IEP	Spinacia oleracea GO terms from Neighborhoods
CC	GO:1905369	endopeptidase complex	IEP	Spinacia oleracea GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR004095	TGS	290	366
IPR006073	GTP-bd	64	180
IPR031662	GTP-binding_2	184	289

External Links

No external refs found!

Spov3_chr4.04520 (Drg1-3)

Expression Profile

Co-expression Networks

Functional Annotation