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  5. Spov3_chr4.04219

Spov3_chr4.04219


Description : EC_3.2 glycosylase


Gene families : OG0073934 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.04219
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_26


Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003887 DNA-directed DNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004180 carboxypeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004185 serine-type carboxypeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004601 peroxidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005507 copper ion binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005856 cytoskeleton IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005885 Arp2/3 protein complex IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0005976 polysaccharide metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006284 base-excision repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006508 proteolysis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006950 response to stress IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006979 response to oxidative stress IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007015 actin filament organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008017 microtubule binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008194 UDP-glycosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008233 peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008236 serine-type peptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0009055 electron transfer activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009250 glucan biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010215 cellulose microfibril organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015020 glucuronosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0015629 actin cytoskeleton IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016020 membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016043 cellular component organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016051 carbohydrate biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016209 antioxidant activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016491 oxidoreductase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016740 transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016757 glycosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016758 hexosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016759 cellulose synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016849 phosphorus-oxygen lyase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0017171 serine hydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019104 DNA N-glycosylase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0020037 heme binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0030198 extracellular matrix organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0030243 cellulose metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0030244 cellulose biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0033897 ribonuclease T2 activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0034061 DNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035251 UDP-glucosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043062 extracellular structure organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044042 glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045010 actin nucleation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045229 external encapsulating structure organization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046527 glucosyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0050896 response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051273 beta-glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051274 beta-glucan biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070008 serine-type exopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071840 cellular component organization or biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0097435 supramolecular fiber organization IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0110165 cellular anatomical entity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140097 catalytic activity, acting on DNA IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 620 938
IPR002885 Pentatricopeptide_rpt 178 224
IPR002885 Pentatricopeptide_rpt 49 76
IPR002885 Pentatricopeptide_rpt 11 41
IPR002885 Pentatricopeptide_rpt 78 106
IPR002885 Pentatricopeptide_rpt 381 428
No external refs found!