Bra010656 (ATU2AF65B, U2AF65b)

Aliases : ATU2AF65B, U2AF65b

Description : large subunit of U2AF pre-RNA splicing auxiliary factor complex

Gene families : OG0001137 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brassica rapa (Bra) PCC: Bra010656
Cluster	Brassica rapa (Bra) Coexpression Clusters (HCCA Algorithm): Cluster_22

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Brassica rapa GO terms from Neighborhoods
BP	GO:0006099	tricarboxylic acid cycle	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0008236	serine-type peptidase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016853	isomerase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0016859	cis-trans isomerase activity	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0017171	serine hydrolase activity	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0045273	respiratory chain complex II	IEP	Brassica rapa GO terms from Neighborhoods
CC	GO:0098803	respiratory chain complex	IEP	Brassica rapa GO terms from Neighborhoods
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Brassica rapa GO terms from Neighborhoods

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	117	186

External Links

No external refs found!