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  5. Spov3_chr4.03657

Spov3_chr4.03657 (HBS1, SKI7)


Aliases : HBS1, SKI7

Description : GTPase component *(HBS1/SPL33/SKI7) of DOM34-HBS1 aberrant mRNA detection complex. associated EXO9 interaction GTPase *(SKI7)


Gene families : OG0009006 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.03657
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_122


Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004842 ubiquitin-protein transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006281 DNA repair IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006974 DNA damage response IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008081 phosphoric diester hydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016567 protein ubiquitination IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016755 aminoacyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016853 isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016859 cis-trans isomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018193 peptidyl-amino acid modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018208 peptidyl-proline modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019538 protein metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019787 ubiquitin-like protein transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032446 protein modification by small protein conjugation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033554 cellular response to stress IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0036211 protein modification process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0042578 phosphoric ester hydrolase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043412 macromolecule modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043687 post-translational protein modification IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051716 cellular response to stimulus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070647 protein modification by small protein conjugation or removal IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140096 catalytic activity, acting on a protein IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901564 organonitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 330 523
IPR004160 Transl_elong_EFTu/EF1A_C 646 753
No external refs found!