- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : SMA1
Description : RNA helicase *(SMA1)
Gene families : OG0005612 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0005612_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr4.03064 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_165 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| MF | GO:0005524 | ATP binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003724 | RNA helicase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003729 | mRNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004386 | helicase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004672 | protein kinase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0005737 | cytoplasm | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006397 | mRNA processing | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006401 | RNA catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006402 | mRNA catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006468 | protein phosphorylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006479 | protein methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006793 | phosphorus metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0008150 | biological_process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008186 | ATP-dependent activity, acting on RNA | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0008213 | protein alkylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009056 | catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009890 | negative regulation of biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009892 | negative regulation of metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0010629 | negative regulation of gene expression | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016301 | kinase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016310 | phosphorylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016570 | histone modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016571 | histone methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016579 | protein deubiquitination | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016740 | transferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0018022 | peptidyl-lysine methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0018024 | obsolete histone lysine N-methyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019538 | protein metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0019899 | enzyme binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0019902 | phosphatase binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0019903 | protein phosphatase binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0031011 | Ino80 complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0031399 | regulation of protein modification process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0032259 | methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0034968 | histone lysine methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0035145 | exon-exon junction complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0036211 | protein modification process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043412 | macromolecule modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043414 | macromolecule methylation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043687 | post-translational protein modification | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044248 | cellular catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0048519 | negative regulation of biological process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0048523 | negative regulation of cellular process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0065009 | regulation of molecular function | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0097346 | INO80-type complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0101005 | deubiquitinase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0140657 | ATP-dependent activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901575 | organic substance catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:1904949 | ATPase complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| No external refs found! |