1. Home
  2. Species
  3. Spinacia oleracea
  4. Sequence
  5. Spov3_chr4.02824

Spov3_chr4.02824 (LOS1)


Aliases : LOS1

Description : mRNA-translocation factor *(eEF2))


Gene families : OG0001537 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0001537_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.02824
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_63


Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0000398 mRNA splicing, via spliceosome IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003676 nucleic acid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003723 RNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004827 proline-tRNA ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005515 protein binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005524 ATP binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005634 nucleus IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005730 nucleolus IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006082 organic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006325 chromatin organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006334 nucleosome assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006338 chromatin remodeling IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006364 rRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006396 RNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006399 tRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006418 tRNA aminoacylation for protein translation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006433 prolyl-tRNA aminoacylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006520 amino acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006807 nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006886 intracellular protein transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008033 tRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008104 protein localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008152 metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008168 methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008170 N-methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008173 RNA methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008175 tRNA methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008380 RNA splicing IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0015031 protein transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016072 rRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016874 ligase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019752 carboxylic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019843 rRNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030515 snoRNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030554 adenyl nucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0031267 small GTPase binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032559 adenyl ribonucleotide binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0033036 macromolecule localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034470 ncRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0034511 U3 snoRNA binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034660 ncRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034728 nucleosome organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042254 ribosome biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043038 amino acid activation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043039 tRNA aminoacylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043170 macromolecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043226 organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043227 membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043228 non-membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043229 intracellular organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043231 intracellular membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043436 oxoacid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044085 cellular component biogenesis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044237 cellular metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044238 primary metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044281 small molecule metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0045184 establishment of protein localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046907 intracellular transport IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0051020 GTPase binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051641 cellular localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051649 establishment of localization in cell IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065004 protein-DNA complex assembly IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070727 cellular macromolecule localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071702 organic substance transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071704 organic substance metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071705 nitrogen compound transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071824 protein-DNA complex organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140101 catalytic activity, acting on a tRNA IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 394 467
IPR005517 Transl_elong_EFG/EF2_IV 611 722
IPR000640 EFG_V-like 724 811
IPR041095 EFG_II 487 549
IPR000795 T_Tr_GTP-bd_dom 17 342
No external refs found!