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  5. Spov3_chr4.02439

Spov3_chr4.02439


Description : not classified


Gene families : OG0020190 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.02439
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_122


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004525 ribonuclease III activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006139 nucleobase-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006351 DNA-templated transcription IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006725 cellular aromatic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008092 cytoskeletal protein binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009057 macromolecule catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009059 macromolecule biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015035 protein-disulfide reductase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015036 disulfide oxidoreductase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015631 tubulin binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016779 nucleotidyltransferase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019438 aromatic compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019899 enzyme binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0019941 modification-dependent protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0031625 ubiquitin protein ligase binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032774 RNA biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0034062 5'-3' RNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034641 cellular nitrogen compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043015 gamma-tubulin binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0044389 ubiquitin-like protein ligase binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046483 heterocycle metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051603 proteolysis involved in protein catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0090304 nucleic acid metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0097747 RNA polymerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140098 catalytic activity, acting on RNA IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901360 organic cyclic compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR008906 HATC_C_dom 571 653
IPR025525 hAT-like_transposase_RNase-H 438 535
No external refs found!