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  5. Spov3_chr4.00375

Spov3_chr4.00375


Description : not classified


Gene families : OG0000527 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0000527_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.00375
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_112


Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0002161 aminoacyl-tRNA editing activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003690 double-stranded DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003916 DNA topoisomerase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0003993 acid phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004180 carboxypeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004185 serine-type carboxypeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005576 extracellular region IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005618 cell wall IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005694 chromosome IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006073 obsolete cellular glucan metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006265 DNA topological change IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006298 mismatch repair IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008238 exopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009308 amine metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009690 cytokinin metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0010817 regulation of hormone levels IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0019139 cytokinin dehydrogenase activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0030312 external encapsulating structure IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0030983 mismatched DNA binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042445 hormone metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0043169 cation binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046872 metal ion binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046914 transition metal ion binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0048046 apoplast IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0065008 regulation of biological quality IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0070008 serine-type exopeptidase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071103 DNA conformation change IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR003653 Peptidase_C48_C 491 585
No external refs found!