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  5. Spov3_chr4.00046

Spov3_chr4.00046 (AtHMGB15, HMGBD15)


Aliases : AtHMGB15, HMGBD15

Description : MyoB class-IIIb myosin receptor. DNA bending architectural protein *(HMG-B)


Gene families : OG0002250 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): OG0002250_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr4.00046
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_87


Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004556 alpha-amylase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0004721 phosphoprotein phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006352 DNA-templated transcription initiation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006766 vitamin metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006767 water-soluble vitamin metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006771 riboflavin metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009110 vitamin biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009231 riboflavin biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016160 amylase activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016161 beta-amylase activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016311 dephosphorylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016485 protein processing IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0018130 heterocycle biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042726 flavin-containing compound metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0042727 flavin-containing compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051604 protein maturation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0071586 CAAX-box protein processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:1901362 organic cyclic compound biosynthetic process IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 982 1049
IPR001606 ARID_dom 754 838
IPR007656 GTD-bd 300 389
No external refs found!