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  5. Spov3_chr3.05217

Spov3_chr3.05217 (AtRH7, PRH75)


Aliases : AtRH7, PRH75

Description : not classified


Gene families : OG0006934 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Spinacia oleracea (Sol) PCC: Spov3_chr3.05217
Cluster Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_163


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004386 helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005543 phospholipid binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0005575 cellular_component IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006352 DNA-templated transcription initiation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006397 mRNA processing IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006486 protein glycosylation IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006810 transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006811 monoatomic ion transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006812 monoatomic cation transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0006887 exocytosis IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0007010 cytoskeleton organization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0008150 biological_process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0009987 cellular process IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0016020 membrane IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016070 RNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016071 mRNA metabolic process IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0016192 vesicle-mediated transport IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0030001 metal ion transport IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0032940 secretion by cell IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0032991 protein-containing complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0035091 phosphatidylinositol binding IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0043413 macromolecule glycosylation IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0046873 metal ion transmembrane transporter activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0046903 secretion IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051179 localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0051234 establishment of localization IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0070085 glycosylation IEP Spinacia oleracea GO terms from Neighborhoods
CC GO:0099023 vesicle tethering complex IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:0140223 general transcription initiation factor activity IEP Spinacia oleracea GO terms from Neighborhoods
BP GO:0140352 export from cell IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1901981 phosphatidylinositol phosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Spinacia oleracea GO terms from Neighborhoods
InterPro domains Description Start Stop
IPR012562 GUCT 541 636
IPR011545 DEAD/DEAH_box_helicase_dom 131 308
IPR001650 Helicase_C 352 452
No external refs found!