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Aliases : NUP155
Description : scaffold nucleoporin of nuclear pore complex *(NUP155)
Gene families : OG0067705 (OrthoFinder Output from 4 Species - Bra, Lsa, Mpo, and Sol) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Spinacia oleracea (Sol) PCC: Spov3_chr3.03814 | |
| Cluster | Spinacia oleracea (Sol) Coexpression Clusters (HCCA Algorithm): Cluster_122 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000145 | exocyst | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0000166 | nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0000176 | nuclear exosome (RNase complex) | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0000178 | exosome (RNase complex) | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003674 | molecular_function | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003676 | nucleic acid binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003677 | DNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003723 | RNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003824 | catalytic activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003887 | DNA-directed DNA polymerase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0003972 | RNA ligase (ATP) activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004525 | ribonuclease III activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004527 | exonuclease activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005488 | binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005515 | protein binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0005524 | ATP binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0005575 | cellular_component | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0005634 | nucleus | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0005643 | nuclear pore | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006260 | DNA replication | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006351 | DNA-templated transcription | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006396 | RNA processing | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006401 | RNA catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006402 | mRNA catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006887 | exocytosis | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0008033 | tRNA processing | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0008152 | metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0008380 | RNA splicing | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008408 | 3'-5' exonuclease activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0008452 | RNA ligase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0009987 | cellular process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016070 | RNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016071 | mRNA metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0016459 | myosin complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0016579 | protein deubiquitination | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016787 | hydrolase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0017056 | structural constituent of nuclear pore | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0017069 | snRNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0017070 | U6 snRNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0017076 | purine nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0030623 | U5 snRNA binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0032553 | ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0032940 | secretion by cell | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0032991 | protein-containing complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0034061 | DNA polymerase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0036094 | small molecule binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0043022 | ribosome binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0043167 | ion binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0043168 | anion binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044237 | cellular metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044238 | primary metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044248 | cellular catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0046903 | secretion | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0051169 | nuclear transport | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0070646 | protein modification by small protein removal | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0071704 | organic substance metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0097747 | RNA polymerase activity | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0099023 | vesicle tethering complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:0140352 | export from cell | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Spinacia oleracea GO terms from Neighborhoods |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Spinacia oleracea GO terms from Neighborhoods |
| CC | GO:1905354 | exoribonuclease complex | IEP | Spinacia oleracea GO terms from Neighborhoods |
| No external refs found! |