Heatmap: Cluster_217 (Lactuca sativa (Lsa) Coexpression Clusters (HCCA Algorithm))

View as: (view raw or row-normalized)

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(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light: 268 uE m-2 s-1
Light: 202.5 uE m-2 s-1 (Control)
Light: 135 uE m-2 s-1
Light: 67.5 uE m-2 s-1
Photoperiod: L24
Photoperiod: L20D4 (Control)
Photoperiod: L12D12
Photoperiod: L8D16
RBW: 4:1:1 (Control)
RBW: 4:1:0
RBW: 3:1:1
RBW: 3:1:0
Nitrogen: 0%
Nitrogen: 25%
Nitrogen: 50%
Nitrogen: 100% (Control)
Nitrogen: 150%
Phosphorous: 0%
Phosphorous: 25%
Phosphorous: 50%
Phosphorous: 100% (Control)
Phosphorous: 150%
Potassium: 0%
Potassium: 25%
Potassium: 50%
Potassium: 100% (Control)
Potassium: 150%
Temperature: 20°C
Temperature: 25°C (Control)
Temperature: 30°C
Temperature: 35°C
-1.84 -1.45 -1.18 -0.8 -1.01 -1.21 -0.68 -0.31 -0.73 -0.8 -0.64 -0.57 0.67 -0.21 0.03 -0.5 -0.34 2.87 0.23 -0.28 -0.67 -0.95 -0.64 -0.24 -0.78 -0.79 -0.85 -1.38 -0.19 0.45 1.69
- - - - -4.24 - - - - - - - - - - - - 4.33 - - - - 3.43 - - - - - -6.27 - -
- - - - - - - - - - - - - - - - - 4.67 - - - - 2.46 - - - - - - - -
- - - - - - - - - - - - - - - - - 4.5 - -0.69 - - 2.96 - - - - - - - -
-1.63 -0.82 -0.43 -0.42 0.19 -0.26 -1.0 -0.93 -0.25 0.0 -0.19 -0.37 1.3 -0.17 -0.04 0.03 -0.73 2.71 -1.66 -2.2 -2.33 -1.6 0.56 -1.1 -0.78 -0.94 -0.45 -1.84 -0.35 0.11 1.42
-1.61 -2.49 -2.83 -3.14 0.2 -1.32 -3.03 -2.36 -1.11 -0.9 -0.41 -1.01 -0.91 0.6 0.59 -0.95 -0.34 3.2 -0.45 -0.85 -0.64 -1.47 2.42 -2.18 -0.78 -0.78 -0.39 -2.0 -0.59 -0.86 -0.34
-0.74 -0.7 -0.75 -0.59 0.22 -0.09 -0.93 -0.67 -0.8 -0.98 -0.71 -1.2 -0.62 -0.17 -0.19 -0.71 -1.34 2.87 0.62 -0.57 -0.21 -0.2 -4.01 -1.25 -0.67 0.09 0.22 -0.71 0.18 0.01 1.24
- - - - -2.69 - - - - - - - 2.04 - - - -0.98 3.97 - - - - 1.88 - - - - - - - 2.78
-1.62 -2.7 -1.43 -3.04 -1.29 -1.8 -0.7 -0.86 -0.5 -0.95 -0.47 0.34 1.81 -0.25 0.87 -0.21 0.43 2.56 -0.57 0.3 -0.02 -0.42 -1.64 -0.1 0.06 -0.24 -0.58 -0.51 -1.0 -0.64 0.48
-3.79 -3.78 -3.82 -1.14 -0.31 -2.86 -1.97 -2.54 -2.58 -3.59 -3.51 -1.88 1.62 0.44 0.45 -2.37 -1.14 3.59 -1.2 -1.26 -1.4 -1.67 1.23 -3.01 -0.55 -1.27 -1.6 -4.42 -3.27 -1.21 1.94
0.48 - - - -1.49 - - - - - - - 0.53 - - - - 4.17 - - - - 3.17 -1.61 - - - - - - -1.06
- - - - - - - - - - - - - - - - - 4.5 - - - - 3.07 - - - - - - - -
- - - - -0.0 -1.93 -2.55 -1.27 -2.54 - -3.38 - 2.33 -3.41 -1.79 -1.54 -1.3 3.77 - -2.66 -3.78 -0.54 -1.43 -0.65 0.57 -2.79 -2.16 -2.65 -0.73 -0.99 2.0
-0.75 0.06 -0.83 -1.5 -0.5 -0.51 -0.01 0.06 -1.22 -0.88 -1.09 -1.24 0.7 -0.04 -0.08 -0.38 -0.43 2.63 -0.6 -0.87 -0.68 -0.56 -0.42 -0.8 -0.63 -0.64 -0.24 -1.26 0.46 0.42 1.47
- - - - -2.58 - - - -3.31 -3.25 -2.68 - 2.47 -3.5 -4.6 -3.35 - 3.96 -3.25 - - - 1.55 - -3.27 -3.91 -3.55 -4.68 -4.85 -3.14 2.5
- - - - -4.98 - - -4.8 -2.85 - -2.3 -0.82 1.61 -1.27 -0.84 -2.08 -1.2 3.99 -3.11 -2.59 -1.61 -5.06 2.35 0.12 - -3.24 -3.79 -1.33 -2.92 -1.2 0.56
-3.73 -4.01 -2.02 -2.23 0.8 -0.65 -2.6 -1.81 -0.62 -1.1 -0.08 -0.23 0.07 -1.14 0.1 -0.86 -0.5 2.81 -0.11 -0.73 -0.91 -0.45 0.83 0.09 0.12 -0.45 -0.16 -1.14 -0.08 0.29 1.5
- - - - -0.51 - - - -2.02 - - -2.84 1.59 -0.25 -1.06 - -1.81 3.92 - - -1.4 - - - - - - - - 0.19 3.11
-6.21 -4.26 -4.7 -6.31 -0.74 -1.38 -3.38 -3.74 -2.22 -2.63 -1.45 -1.94 0.36 -0.03 -0.32 -1.75 -2.42 3.93 -0.47 -1.59 -1.91 -1.38 - -3.01 -1.97 -1.75 -1.07 -2.85 -1.7 -0.64 2.59
- - - - -3.82 - - - - - -2.48 - -0.33 - -2.4 - - 4.31 - - - - 3.28 - - -2.56 - -3.8 - - -
- - - - - - - - - - - - 1.52 - - - -3.77 4.41 -3.43 - - - 2.21 -3.93 - - - - -1.29 - 0.62
- - - - - - - -0.36 0.65 -0.03 - 0.43 2.41 - -1.44 - -0.39 4.17 - -0.72 -0.75 - - - - - - -1.79 - -1.67 -
- -2.88 -4.61 -3.07 -2.74 -7.02 -2.33 -2.93 -2.32 -2.3 -1.81 -0.99 1.7 -0.45 -0.22 -1.44 -0.48 3.68 -1.4 -1.01 -1.56 -2.47 0.69 -0.94 -0.72 -1.57 -1.88 -3.18 -1.73 -0.54 2.14
-4.03 -3.64 -3.2 -2.56 -3.11 -2.51 -3.35 -3.86 -2.56 -1.96 -2.21 -1.91 2.31 -1.55 -1.16 -1.62 -1.42 3.59 -1.73 -1.72 -2.09 -2.38 1.43 -2.02 -1.75 -1.64 -1.49 -1.83 -1.61 -1.19 2.23
-0.07 0.12 -0.34 -0.2 -0.49 -1.46 -1.03 -1.38 -1.22 -1.03 -0.99 -1.28 1.56 0.77 -0.34 -0.94 -0.65 2.55 -0.8 -0.53 -1.02 -1.12 1.38 -1.24 -1.12 -0.96 -0.86 -0.92 -0.88 -0.8 1.41
- - - -4.8 -3.6 -3.53 -4.3 -5.93 -3.74 -4.64 -3.52 -3.11 2.52 -4.31 -6.01 -3.67 -3.07 3.92 -5.77 -2.46 -3.97 -4.46 2.17 -3.41 -3.61 -4.63 -2.86 -3.6 -5.16 -2.8 1.94
- - -0.94 - - - -1.09 -2.04 - - - - 0.92 -1.03 -0.41 - - 4.09 - -1.36 - 0.4 - - -0.72 - -0.99 - -2.2 0.32 2.41
-3.42 - -3.47 -4.05 -5.62 -3.73 -2.42 -3.59 -5.24 -4.15 - - 2.42 -4.2 - - - 3.83 -5.6 -4.53 -3.93 -2.69 1.58 -5.46 -5.35 -3.64 -3.72 -0.82 - -3.77 2.71
-3.42 -5.37 -5.32 -2.57 -4.97 -2.56 -0.48 -0.4 -2.93 -1.85 -3.07 -1.74 2.55 -2.72 -1.42 -1.02 -0.52 3.56 -1.79 -0.53 -2.07 -1.49 1.19 -0.6 -0.55 -1.49 -2.55 -1.45 -1.54 -0.83 0.85
-0.55 -1.03 0.26 0.15 -3.74 -1.71 - -3.87 -3.64 -1.27 -3.75 -3.78 1.53 -0.81 -2.62 - -0.81 3.96 - -3.98 -2.96 - 1.43 - - -0.48 -3.62 -3.74 - -1.55 1.37
-3.56 - - - -2.32 -2.95 - - -3.11 - -3.83 -4.09 2.77 -1.6 -2.74 - -2.82 3.89 -1.82 -3.13 -2.02 - 2.17 - -3.9 -2.33 - -1.94 -3.81 -2.68 1.16
- - - - - - - - - - - - -2.04 -0.92 - - - 4.29 - - - - 3.38 - - - - - - - -2.09
- - - - - - - - - - - - 0.16 - - - - 4.56 - - - - - - - - - - - - 2.64
-2.26 -2.67 -2.59 -1.67 -0.95 -0.11 -0.88 -0.45 -0.59 -0.42 -0.84 -1.05 1.13 -0.22 -0.5 -0.78 -1.13 3.28 -0.76 -0.98 -0.88 -1.09 1.07 -1.28 -1.17 -0.91 -0.69 -1.48 -0.55 -0.71 1.36
-0.25 -1.19 - - -0.29 -0.4 - -1.24 - - -2.2 - 0.47 -0.18 -1.08 - -3.23 3.93 - -1.39 -0.87 - 2.45 -0.5 - -1.14 -1.42 -2.28 -1.24 -1.3 -1.12
- -4.98 -3.38 -2.14 -1.04 -2.29 -2.74 -2.28 -0.71 -1.9 -1.3 -1.56 2.56 -1.31 -0.52 -1.0 -1.16 3.36 -0.51 -2.48 -1.95 -1.75 -4.03 -1.49 -1.31 -1.48 -0.5 -2.31 -0.29 -0.64 2.26
-2.35 -3.5 -2.73 -2.25 0.05 -0.95 -0.4 -0.49 -0.53 -1.64 -0.97 -0.45 1.34 -0.05 0.09 -0.74 -0.59 3.2 -0.44 -1.27 -1.06 -1.31 -3.73 -0.53 -0.95 -1.85 -0.76 -2.02 -1.32 -0.39 2.16
-1.56 -2.18 -0.63 -1.61 -0.51 -0.76 -2.57 -1.33 -1.63 -1.23 -2.75 -3.24 1.68 -1.17 -1.3 -1.8 -2.04 3.89 -3.79 -3.72 -0.89 -1.78 -0.11 -2.96 -2.91 -2.46 -0.51 -1.64 -0.49 -0.88 1.39
-2.45 -3.41 -2.08 -3.08 -3.71 -4.67 -3.42 -3.1 -2.61 -2.38 -3.38 -3.03 2.39 -5.37 -1.87 -2.82 -1.8 3.92 -2.78 -1.9 -1.41 -3.09 1.32 -1.96 -2.24 -1.34 -4.11 -4.38 -3.13 -0.92 1.75
- - - -2.45 -2.43 -3.72 -3.78 -1.77 -4.9 -0.9 -0.97 -2.5 2.59 - -0.93 -2.01 -0.65 3.16 -2.39 -2.35 -2.2 -4.51 1.78 -2.54 -1.52 -2.69 -2.44 -5.01 -3.22 -2.42 2.86
- - - - - - - - - - - - - - - - - 4.59 - - - - - - - - - - - - 2.79
-7.9 - - - -4.41 -5.37 - - -6.55 -7.33 -7.27 -5.54 -3.35 -4.96 -5.12 -6.13 -6.01 4.56 -5.95 -7.2 -5.78 -7.07 2.73 -4.32 -3.5 -6.33 -5.75 -7.96 -9.88 -7.21 -2.33
-3.68 -2.59 -3.44 -4.32 -0.06 -0.45 -0.95 -1.51 -0.6 -1.3 -0.54 -0.79 0.88 -0.2 0.04 -0.15 -0.24 2.73 -0.35 -0.7 -0.53 -0.22 1.05 -0.72 -0.24 -0.26 0.58 -0.55 -0.41 -0.22 1.32
-2.74 -1.8 -2.95 -1.31 -0.7 -0.29 -1.83 -2.27 -1.23 -1.0 -1.04 -0.99 2.15 -0.6 -0.94 -0.88 -1.26 3.33 -1.34 -1.44 -1.15 -1.76 -0.9 -2.23 -1.37 -2.0 -1.79 -1.6 -0.88 -0.13 2.19
-4.47 - -1.54 -4.5 -2.23 -2.31 -1.65 -0.7 -5.06 -3.91 -1.99 -1.34 1.76 0.17 -0.44 -4.43 -1.12 3.72 -1.56 -1.66 -3.43 -3.21 1.74 -0.62 -2.13 -4.17 -2.12 -3.84 -0.6 -0.41 1.41
-2.49 -1.77 -0.95 -0.22 -0.38 -0.6 -0.7 -0.09 -0.44 -0.31 -0.63 -0.15 0.9 -1.46 -0.23 -0.62 -0.34 2.57 -0.23 -0.64 -0.88 -1.15 0.67 -0.32 -0.32 -0.3 -0.32 -1.28 0.52 0.86 0.72
- - -1.21 - -1.59 -3.13 - -2.06 - -2.2 -3.02 -1.71 -1.07 -0.37 -1.94 - -2.03 4.18 -3.34 - -3.18 - 3.07 - - - - - -1.55 -2.23 -2.15
-1.01 -1.75 -3.68 -1.86 -0.88 -0.42 -1.3 -2.01 -0.99 -0.8 -0.74 -0.22 1.16 -1.35 -0.16 -0.53 -0.52 2.76 -0.18 -0.31 0.25 -0.02 0.92 -0.82 -0.85 -0.57 -0.84 -0.98 -0.62 -0.17 1.82
-1.41 -1.05 -0.93 -1.3 0.19 -0.03 -1.33 -1.98 -0.49 -0.7 -0.51 -0.59 -0.08 0.2 0.45 -0.69 -0.58 2.51 0.28 -0.69 -0.42 -0.84 0.02 -0.75 -0.36 -0.39 -0.31 -0.85 0.46 0.84 1.31
-1.77 -2.29 -2.45 -1.8 -1.4 -1.85 -1.58 -1.07 -2.24 -1.68 -2.4 -1.54 2.47 -1.1 -2.5 -1.51 -1.29 2.97 -2.95 -1.93 -1.87 -1.97 2.25 -0.68 -0.15 -1.39 -1.5 -1.33 -1.65 -1.45 1.89
-1.23 -1.89 0.62 0.6 -1.73 -1.74 -1.99 -3.09 -2.87 -1.59 -1.18 -1.31 2.19 -0.3 -0.88 -1.72 -1.32 3.2 -3.07 -2.16 -2.98 -2.49 1.12 -3.12 -2.0 -2.73 -2.46 -1.85 -4.25 -2.17 2.35
- - - -5.01 -1.21 -0.97 -0.38 0.11 -1.02 -0.67 -2.23 -1.83 1.07 -1.46 0.5 -0.77 -0.38 3.47 -0.38 -1.57 -1.48 -1.54 -5.31 -0.62 -0.21 -0.76 -1.82 -2.03 -0.8 0.12 2.03
-4.69 -3.23 -2.55 -1.43 -0.5 -1.15 -0.76 -0.71 -1.3 -0.72 -0.83 -0.81 0.74 -2.57 -0.92 -0.73 -0.75 3.2 -1.15 -0.27 -1.1 -0.58 -2.24 -0.85 -0.45 -0.66 -0.57 -1.06 1.09 0.73 1.84
-3.33 -3.7 -3.75 -2.84 -0.13 -1.6 -2.47 -3.57 -1.68 -1.65 -2.6 -0.99 1.92 -0.28 -0.26 -1.34 -0.94 3.41 -1.23 -1.1 -1.43 -1.31 0.57 -0.7 -0.71 -1.39 -0.73 -1.93 -1.02 -1.06 2.09
- -0.34 -1.04 -2.25 -1.69 -1.85 -0.9 -2.01 -3.39 -1.4 -1.2 -0.94 0.4 -1.03 -1.09 -0.45 -0.77 3.62 -2.07 -2.42 -3.46 -2.5 0.74 -0.95 -1.71 -0.38 -2.55 -2.67 -0.31 0.47 2.12
-3.95 -4.0 - -2.99 0.5 -0.64 -1.19 -2.35 -4.44 -1.6 -2.19 -4.5 -0.82 -1.31 -1.56 -1.78 -2.03 3.83 -1.21 -2.53 - -1.13 3.06 -1.8 -0.95 -4.31 -3.34 - -0.73 -1.8 -2.77
- - - - - - -0.7 - - - - -1.85 - 1.28 -0.67 -1.42 - 4.19 - -0.02 - -0.9 2.45 -1.98 - - - - - -0.77 -0.88
- - - - - - - - -3.69 -4.55 - -3.9 2.69 - -3.73 - -5.49 3.97 - -5.59 - - 1.31 -3.63 -2.58 - - - - -3.6 2.52

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.